G551141


Basic Information

Item Value
gene id G551141
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81069070 ~ 81069283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624087
GCCTAGAATGGATCCTTGAGGGACACCCATGGTGACTTGCAGTGGTGTAGATTCTCATTACTTCACTGGCTATGTTTAGTGCATTAAATAATCTGAGATCCAGGCCAGGCATTCCTGTGAGAGGCCTATGTCTTCCAGTCTGTTGAGCAGGATGATGTGGTTGACTGAGTCAAATGCCTTGGCTAGGTCCATGAAAATGGCCACAGAGTAGTGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624087 True 214 lncRNA 0.47 1 81069070 81069283

Neighbor

gene id symbol gene type direction distance location
LOC110516752 NA coding upstream 589238 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 638098 80415414 ~ 80430972 (+)
LOC110506798 NA coding upstream 742689 80324997 ~ 80326381 (+)
LOC110526764 fbn1 coding upstream 751535 80166183 ~ 80317535 (+)
LOC110506794 LOC106596910 coding upstream 922002 80108555 ~ 80147068 (+)
LOC110506811 LOC106562533 coding downstream 70940 81140223 ~ 81154890 (+)
LOC110506818 NA coding downstream 199761 81269044 ~ 81284987 (+)
LOC110526110 LOC106562529 coding downstream 233480 81302763 ~ 81350307 (+)
LOC110526107 scg3 coding downstream 365811 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 455524 81524807 ~ 81547341 (+)
G551131 NA non-coding upstream 13686 81055130 ~ 81055384 (+)
G551119 NA non-coding upstream 23552 81045067 ~ 81045518 (+)
G551116 NA non-coding upstream 28014 81040772 ~ 81041056 (+)
G551112 NA non-coding upstream 37048 81031815 ~ 81032022 (+)
G551106 NA non-coding upstream 43453 81025331 ~ 81025617 (+)
G551143 NA non-coding downstream 4188 81073471 ~ 81074192 (+)
G551145 NA non-coding downstream 15486 81084769 ~ 81085093 (+)
G551156 NA non-coding downstream 31915 81101198 ~ 81101491 (+)
G551174 NA non-coding downstream 47700 81116983 ~ 81117196 (+)
G551175 NA non-coding downstream 48617 81117900 ~ 81118908 (+)
G551043 NA other upstream 147634 80920707 ~ 80921436 (+)
G550305 NA other upstream 868541 80200170 ~ 80200529 (+)
G550265 NA other upstream 999785 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 1491080 79571838 ~ 79577990 (+)
LOC110506150 LOC106562517 other downstream 775634 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 952768 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 1060551 82128769 ~ 82198551 (+)
G551805 NA other downstream 1195686 82264969 ~ 82265749 (+)

Expression


Co-expression Network