G551143


Basic Information

Item Value
gene id G551143
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81073471 ~ 81074192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624089
ctaactaacactgctgctgcagactaactaatactgctgctgctgactaactaacactgctgctgcagactaactaacactgctgctgcagactaactaacactgctgctgcagactaactaacactgctgctgctgcagactaactaacactgctgctgcagactaactaacactgctgctgcagactaactaatactgctgctgcaggctaactaatactgctgctgcagactaactaacactgctactgctgcagactaactaacactgctgctgcagactaactaacactgctgctgctgcagactaactaacactgctgctgctgctgactaactaacactgctgctgcaggctaactaacactgctgctgcagactaactaacaatgctactgctgcagactaactaacactgctgctgcaggataactaacactgctgctgcagactaactaacactgctgctgcagactaactaacactgctgctgctgactaactaacactgctgctgctgcagactaactaacactgctgctgcagactaactaacactgctgctgcagactaactaacactgctgctgcagactaactaatactgctgctgcaggataactaacactgctgctgcagactaactaacactgctgctgcagactaactaacactgctgctgcagactaactaacactgctgctgctgcagactaactaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624089 True 722 lncRNA 0.47 1 81073471 81074192

Neighbor

gene id symbol gene type direction distance location
LOC110516752 NA coding upstream 593639 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 642499 80415414 ~ 80430972 (+)
LOC110506798 NA coding upstream 747090 80324997 ~ 80326381 (+)
LOC110526764 fbn1 coding upstream 755936 80166183 ~ 80317535 (+)
LOC110506794 LOC106596910 coding upstream 926403 80108555 ~ 80147068 (+)
LOC110506811 LOC106562533 coding downstream 66031 81140223 ~ 81154890 (+)
LOC110506818 NA coding downstream 194852 81269044 ~ 81284987 (+)
LOC110526110 LOC106562529 coding downstream 228571 81302763 ~ 81350307 (+)
LOC110526107 scg3 coding downstream 360902 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 450615 81524807 ~ 81547341 (+)
G551141 NA non-coding upstream 4188 81069070 ~ 81069283 (+)
G551131 NA non-coding upstream 18087 81055130 ~ 81055384 (+)
G551119 NA non-coding upstream 27953 81045067 ~ 81045518 (+)
G551116 NA non-coding upstream 32415 81040772 ~ 81041056 (+)
G551112 NA non-coding upstream 41449 81031815 ~ 81032022 (+)
G551145 NA non-coding downstream 10577 81084769 ~ 81085093 (+)
G551156 NA non-coding downstream 27006 81101198 ~ 81101491 (+)
G551174 NA non-coding downstream 42791 81116983 ~ 81117196 (+)
G551175 NA non-coding downstream 43708 81117900 ~ 81118908 (+)
G551181 NA non-coding downstream 50285 81124477 ~ 81125151 (+)
G551043 NA other upstream 152035 80920707 ~ 80921436 (+)
G550305 NA other upstream 872942 80200170 ~ 80200529 (+)
G550265 NA other upstream 1004186 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 1495481 79571838 ~ 79577990 (+)
LOC110506150 LOC106562517 other downstream 770725 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 947859 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 1055642 82128769 ~ 82198551 (+)
G551805 NA other downstream 1190777 82264969 ~ 82265749 (+)

Expression


Co-expression Network