G551224


Basic Information

Item Value
gene id G551224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81215566 ~ 81215921 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624190
cagctgtagaGTCTCACGTCATTGACACACCTCCTAGTTGACTTCCATAAACATTGGTCTGTGCCAGGTTTCCATGGCGAGGACaatgtcacaacaacagacacaatACAGGTGCAGCTGAAGTAGGTCTAAACTAggaacagactgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtctgtccagaCCTCGATGGCGTCTTTCAGGGAGCCAGCCAGCAGGAAGAAGGCAGCAGCCTGTTCAAAGCGCTGTTTCCCCAGCAGAGAGAAAGCGTTCTTCAGAGCTGCTTTACGCCAGCGGTCCTCACTGAAGTTATTCTTAAAGAACACCGTCATCTTCTCATCACGCTGagac

Function

NR:

description
dmX-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624190 True 356 lncRNA 0.50 1 81215566 81215921

Neighbor

gene id symbol gene type direction distance location
LOC110506811 LOC106562533 coding upstream 62737 81140223 ~ 81154890 (+)
LOC110516752 NA coding upstream 735734 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 784594 80415414 ~ 80430972 (+)
LOC110506798 NA coding upstream 889185 80324997 ~ 80326381 (+)
LOC110526764 fbn1 coding upstream 898031 80166183 ~ 80317535 (+)
LOC110506818 NA coding downstream 53123 81269044 ~ 81284987 (+)
LOC110526110 LOC106562529 coding downstream 86842 81302763 ~ 81350307 (+)
LOC110526107 scg3 coding downstream 219173 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 308886 81524807 ~ 81547341 (+)
LOC110506823 LOC105015051 coding downstream 335265 81551186 ~ 81568248 (+)
G551206 LOC106562546 non-coding upstream 32182 81179908 ~ 81183384 (+)
G551181 NA non-coding upstream 90415 81124477 ~ 81125151 (+)
G551175 NA non-coding upstream 96658 81117900 ~ 81118908 (+)
G551174 NA non-coding upstream 98370 81116983 ~ 81117196 (+)
G551225 NA non-coding downstream 401 81216322 ~ 81216630 (+)
G551226 NA non-coding downstream 1050 81216971 ~ 81217174 (+)
G551227 NA non-coding downstream 1940 81217861 ~ 81218158 (+)
G551228 NA non-coding downstream 4092 81220013 ~ 81220222 (+)
G551229 LOC106562546 non-coding downstream 4614 81220535 ~ 81221021 (+)
G551043 NA other upstream 294130 80920707 ~ 80921436 (+)
G550305 NA other upstream 1015037 80200170 ~ 80200529 (+)
G550265 NA other upstream 1146281 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 1637576 79571838 ~ 79577990 (+)
LOC110506150 LOC106562517 other downstream 628996 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 806130 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 913913 82128769 ~ 82198551 (+)
G551805 NA other downstream 1049048 82264969 ~ 82265749 (+)

Expression


Co-expression Network