G551294


Basic Information

Item Value
gene id G551294
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81325790 ~ 81328151 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624291
gttaaactctttacagcaggtacagtagtaaaactccttagagcaggtacagtagtaaaactctttacagcaggtacagtagtataactccttacagcaggtacagtagtataactccttacagcaggtacagtagtaaaactctagagcaggtacagtagtaaaactccttacagcaggtacagtagtataactccttacagcaggtacagtagtaaaactccttacagcaggtacagtagtaaaactccttacagcaggtacagtagtaaaactccttagagc

Function

NR:

description
PREDICTED: mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624291 True 285 lncRNA 0.40 2 81325790 81328151

Neighbor

gene id symbol gene type direction distance location
LOC110506818 NA coding upstream 40803 81269044 ~ 81284987 (+)
LOC110506811 LOC106562533 coding upstream 172961 81140223 ~ 81154890 (+)
LOC110516752 NA coding upstream 845958 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 894818 80415414 ~ 80430972 (+)
LOC110506798 NA coding upstream 999409 80324997 ~ 80326381 (+)
LOC110526107 scg3 coding downstream 106943 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 196656 81524807 ~ 81547341 (+)
LOC110506823 LOC105015051 coding downstream 223035 81551186 ~ 81568248 (+)
LOC118964937 NA coding downstream 331745 81659896 ~ 81661991 (+)
LOC110526974 LOC106562522 coding downstream 353733 81681884 ~ 81734963 (+)
G551229 LOC106562546 non-coding upstream 104769 81220535 ~ 81221021 (+)
G551228 NA non-coding upstream 105568 81220013 ~ 81220222 (+)
G551227 NA non-coding upstream 107632 81217861 ~ 81218158 (+)
G551226 NA non-coding upstream 108616 81216971 ~ 81217174 (+)
G551225 NA non-coding upstream 109160 81216322 ~ 81216630 (+)
G551305 NA non-coding downstream 39674 81367825 ~ 81368163 (+)
G551306 NA non-coding downstream 41255 81369406 ~ 81369698 (+)
G551307 NA non-coding downstream 43472 81371623 ~ 81371945 (+)
G551311 NA non-coding downstream 63496 81391647 ~ 81392021 (+)
G551326 NA non-coding downstream 101070 81429221 ~ 81434177 (+)
G551043 NA other upstream 404354 80920707 ~ 80921436 (+)
G550305 NA other upstream 1125261 80200170 ~ 80200529 (+)
G550265 NA other upstream 1256505 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 1747800 79571838 ~ 79577990 (+)
LOC110506150 LOC106562517 other downstream 516766 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 693900 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 801683 82128769 ~ 82198551 (+)
G551805 NA other downstream 936818 82264969 ~ 82265749 (+)

Expression


Co-expression Network