G551326


Basic Information

Item Value
gene id G551326
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81429221 ~ 81434177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624333
tgtcatgtattgtcatgttgtgtcctgttcctgttctttctcttcaccctgtctccctctgctggtcgtattaggttaccttttcttcctctctttcccccagctgttccttgtcttctctaactacctcgttcaccccttttcccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgcttctgtctttgtcggattcttgtttgtgttattcatgcctgaaccagactatcgtcatgtttgctgcaaccttgtcctgtcctgtcggaatctgccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624333 True 296 lncRNA 0.47 2 81429221 81434177

Neighbor

gene id symbol gene type direction distance location
LOC110526110 LOC106562529 coding upstream 78914 81302763 ~ 81350307 (+)
LOC110506818 NA coding upstream 144234 81269044 ~ 81284987 (+)
LOC110506811 LOC106562533 coding upstream 276392 81140223 ~ 81154890 (+)
LOC110516752 NA coding upstream 949389 80477819 ~ 80479832 (+)
myef2 myef2 coding upstream 998249 80415414 ~ 80430972 (+)
LOC110526107 scg3 coding downstream 917 81435094 ~ 81466198 (+)
LOC110506821 LOC106562526 coding downstream 90630 81524807 ~ 81547341 (+)
LOC110506823 LOC105015051 coding downstream 117009 81551186 ~ 81568248 (+)
LOC118964937 NA coding downstream 225719 81659896 ~ 81661991 (+)
LOC110526974 LOC106562522 coding downstream 247707 81681884 ~ 81734963 (+)
G551311 NA non-coding upstream 37200 81391647 ~ 81392021 (+)
G551307 NA non-coding upstream 57276 81371623 ~ 81371945 (+)
G551306 NA non-coding upstream 59523 81369406 ~ 81369698 (+)
G551305 NA non-coding upstream 61058 81367825 ~ 81368163 (+)
G551296 NA non-coding upstream 94872 81326134 ~ 81334349 (+)
G551333 NA non-coding downstream 36704 81470881 ~ 81472859 (+)
G551334 NA non-coding downstream 38967 81473144 ~ 81474264 (+)
G551339 NA non-coding downstream 46931 81481108 ~ 81481342 (+)
G551342 NA non-coding downstream 52821 81486998 ~ 81487630 (+)
G551356 NA non-coding downstream 91582 81525759 ~ 81608457 (+)
G551043 NA other upstream 507785 80920707 ~ 80921436 (+)
G550305 NA other upstream 1228692 80200170 ~ 80200529 (+)
G550265 NA other upstream 1359936 80068748 ~ 80069285 (+)
LOC118936661 LOC106592882 other upstream 1851231 79571838 ~ 79577990 (+)
LOC110506150 LOC106562517 other downstream 410740 81815343 ~ 81860498 (+)
LOC118964938 LOC106562620 other downstream 587874 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 695657 82128769 ~ 82198551 (+)
G551805 NA other downstream 830792 82264969 ~ 82265749 (+)

Expression


Co-expression Network