G551342


Basic Information

Item Value
gene id G551342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81486998 ~ 81487630 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624351
atatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatcttcttgtatccaaatctggctttaaacttcttcacaacagtttctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcttttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttgaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624351 True 633 lncRNA 0.41 1 81486998 81487630

Neighbor

gene id symbol gene type direction distance location
LOC110526107 scg3 coding upstream 20800 81435094 ~ 81466198 (+)
LOC110526110 LOC106562529 coding upstream 136691 81302763 ~ 81350307 (+)
LOC110506818 NA coding upstream 202011 81269044 ~ 81284987 (+)
LOC110506811 LOC106562533 coding upstream 334169 81140223 ~ 81154890 (+)
LOC110516752 NA coding upstream 1007166 80477819 ~ 80479832 (+)
LOC110506821 LOC106562526 coding downstream 37177 81524807 ~ 81547341 (+)
LOC110506823 LOC105015051 coding downstream 63556 81551186 ~ 81568248 (+)
LOC118964937 NA coding downstream 172266 81659896 ~ 81661991 (+)
LOC110526974 LOC106562522 coding downstream 194254 81681884 ~ 81734963 (+)
LOC110506150 LOC106562517 coding downstream 327713 81815343 ~ 81860498 (+)
G551339 NA non-coding upstream 5656 81481108 ~ 81481342 (+)
G551334 NA non-coding upstream 12734 81473144 ~ 81474264 (+)
G551333 NA non-coding upstream 14139 81470881 ~ 81472859 (+)
G551326 NA non-coding upstream 52821 81429221 ~ 81434177 (+)
G551311 NA non-coding upstream 94977 81391647 ~ 81392021 (+)
G551356 NA non-coding downstream 38129 81525759 ~ 81608457 (+)
G551366 NA non-coding downstream 64766 81552396 ~ 81554086 (+)
G551370 NA non-coding downstream 85798 81573428 ~ 81576841 (+)
G551394 NA non-coding downstream 123564 81611194 ~ 81611400 (+)
G551405 NA non-coding downstream 157131 81644761 ~ 81645951 (+)
G551043 NA other upstream 565562 80920707 ~ 80921436 (+)
myef2 myef2 other upstream 1056069 80415414 ~ 80430972 (+)
G550305 NA other upstream 1286469 80200170 ~ 80200529 (+)
G550265 NA other upstream 1417713 80068748 ~ 80069285 (+)
LOC118964938 LOC106562620 other downstream 534421 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 other downstream 642204 82128769 ~ 82198551 (+)
G551805 NA other downstream 777339 82264969 ~ 82265749 (+)
G551889 LOC106587688 other downstream 989288 82476918 ~ 82483802 (+)

Expression


Co-expression Network