G551678


Basic Information

Item Value
gene id G551678
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81878909 ~ 81880142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624794
TCCAGGGCCATGCGAACAGGGGGCAGACCTCCACAGCTGTGCTTGTACACCGTCTCCAGGATCTGACAGCCGTGGATCTAATTAGAACATACAGGATATGACCTCATTTCCATATTCCACACTAATTGATTCAACTGTGCCTACCCATGATGCACTCTGCTCTGAGCGCTGTGACAACTTTGCGCCCCTGTACCACAGCAGCCACCATGATGAACTTTAAATTGGTAGAAAGATGGTATTGTTACAGAAAAATTCTAAACTAAGTCACATCAGAAATGTGTTGACCTTTGAGAACACAAAGTTTTTGTAGAGCGCTATGGGTGTATGAAAAGTGCTTTATGAGTGTCTTAAATCATTTCCTCCAAAGTAATTGTGTTTGTGTGATTTCTCAGTCATATCATGCCCTTATCTTCTGGGACTGTATTGTCTCATCTCCATTGTAATGCCTTCACCTTCTGGGACTCTTGTCTTGTCTCCATTGTAATGCCCTTCCTTACCTTCTGGGACTGTCTCGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTCTTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATCGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTCTTGTCTCCATTGTAATGCCCTAACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATCGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCACTATAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATTGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTATCGTCTCCATTGTAATGCCCTTACCTTCTGGGACTGTAT

Function

NR:

description
PREDICTED: gamma-tubulin complex component 4 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624794 True 1196 lncRNA 0.45 2 81878909 81880142

Neighbor

gene id symbol gene type direction distance location
trnap-ugg-9 NA coding upstream 9586 81869250 ~ 81869323 (+)
LOC110506150 LOC106562517 coding upstream 18411 81815343 ~ 81860498 (+)
LOC110526974 LOC106562522 coding upstream 143949 81681884 ~ 81734963 (+)
LOC118964937 NA coding upstream 216918 81659896 ~ 81661991 (+)
LOC110506823 LOC105015051 coding upstream 310661 81551186 ~ 81568248 (+)
cdkn2aip LOC106587807 coding downstream 3251 81883393 ~ 81888699 (+)
LOC110506160 LOC106562619 coding downstream 64512 81944654 ~ 82019523 (+)
LOC118964938 LOC106562620 coding downstream 141869 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 coding downstream 248627 82128769 ~ 82198551 (+)
trnaa-ugc-18 NA coding downstream 269577 82149719 ~ 82149795 (+)
G551675 NA non-coding upstream 6293 81872393 ~ 81872616 (+)
G551667 NA non-coding upstream 24155 81854267 ~ 81854754 (+)
G551647 NA non-coding upstream 85299 81791890 ~ 81793610 (+)
G551646 NA non-coding upstream 88154 81790091 ~ 81790755 (+)
G551629 NA non-coding upstream 131589 81742540 ~ 81747320 (+)
G551683 NA non-coding downstream 25492 81905634 ~ 81906229 (+)
G551684 NA non-coding downstream 28351 81908493 ~ 81908732 (+)
G551721 NA non-coding downstream 231893 82112035 ~ 82114356 (+)
G551752 NA non-coding downstream 235250 82115392 ~ 82115740 (+)
G551770 NA non-coding downstream 274486 82154628 ~ 82155340 (+)
LOC110526107 scg3 other upstream 412711 81435094 ~ 81466198 (+)
G551043 NA other upstream 957473 80920707 ~ 80921436 (+)
myef2 myef2 other upstream 1447980 80415414 ~ 80430972 (+)
G550305 NA other upstream 1678380 80200170 ~ 80200529 (+)
G551805 NA other downstream 384827 82264969 ~ 82265749 (+)
G551889 LOC106587688 other downstream 596776 82476918 ~ 82483802 (+)
LOC110526694 pcsk6 other downstream 709395 82532518 ~ 82627600 (+)

Expression


Co-expression Network