G551684


Basic Information

Item Value
gene id G551684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 81908493 ~ 81908732 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624802
GTAGACTACAAACCCTGAATTCAAAGGCTGGTTGAAGCCGTTTATTGGAGATGATACACGGGCATACTGCCTGTACTGTAAGGCTGATTTCGACGCCAAACTTAGTGATGTAAAAAAACACATGACAACTCAAAAACATACTCAAAAGGCAAAGCCTTATAACAGCTCCACCCAAAACAAGCTGCCAtttatggttaaaaaaaaatgacTCTGCAAAAAAGTCTGAGGCCACCATGGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624802 True 240 lncRNA 0.41 1 81908493 81908732

Neighbor

gene id symbol gene type direction distance location
cdkn2aip LOC106587807 coding upstream 19794 81883393 ~ 81888699 (+)
trnap-ugg-9 NA coding upstream 39170 81869250 ~ 81869323 (+)
LOC110506150 LOC106562517 coding upstream 47995 81815343 ~ 81860498 (+)
LOC110526974 LOC106562522 coding upstream 173533 81681884 ~ 81734963 (+)
LOC118964937 NA coding upstream 246502 81659896 ~ 81661991 (+)
LOC110506160 LOC106562619 coding downstream 35922 81944654 ~ 82019523 (+)
LOC118964938 LOC106562620 coding downstream 113279 82022011 ~ 82107452 (+)
LOC110526975 LOC106562727 coding downstream 220037 82128769 ~ 82198551 (+)
trnaa-ugc-18 NA coding downstream 240987 82149719 ~ 82149795 (+)
LOC110526669 hypk coding downstream 343120 82251852 ~ 82253308 (+)
G551683 NA non-coding upstream 2264 81905634 ~ 81906229 (+)
G551678 NA non-coding upstream 28351 81878909 ~ 81880142 (+)
G551675 NA non-coding upstream 35877 81872393 ~ 81872616 (+)
G551667 NA non-coding upstream 53739 81854267 ~ 81854754 (+)
G551647 NA non-coding upstream 114883 81791890 ~ 81793610 (+)
G551721 NA non-coding downstream 203303 82112035 ~ 82114356 (+)
G551752 NA non-coding downstream 206660 82115392 ~ 82115740 (+)
G551770 NA non-coding downstream 245896 82154628 ~ 82155340 (+)
G551804 NA non-coding downstream 355063 82263795 ~ 82264106 (+)
G551848 NA non-coding downstream 476185 82384917 ~ 82385727 (+)
LOC110526107 scg3 other upstream 442295 81435094 ~ 81466198 (+)
G551043 NA other upstream 987057 80920707 ~ 80921436 (+)
myef2 myef2 other upstream 1477564 80415414 ~ 80430972 (+)
G550305 NA other upstream 1707964 80200170 ~ 80200529 (+)
G551805 NA other downstream 356237 82264969 ~ 82265749 (+)
G551889 LOC106587688 other downstream 568186 82476918 ~ 82483802 (+)
LOC110526694 pcsk6 other downstream 680805 82532518 ~ 82627600 (+)

Expression


Co-expression Network