G551752


Basic Information

Item Value
gene id G551752
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 82115392 ~ 82115740 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU624876
ccaacgggttcttgttcacctccttgaccaaggcccttctcacctgattgctcagtttggccgggcggtcagctctaggaagagtcttggtggttccaaacttcttccatttaagaatgatggaggccactgtgatcttggggaccttcaatgctacatacatttgtttggtacccttccccagatctgtgcctcgacataatcctgtctctgagctctacaaaaaatgtatttgacctcatggcttggattttgctctgacatgcgttgtcacctgtgggaccttatatagacaggtgtgtgatttTCCAAACAGGTGTGTCCCTTTCACAAACTCTGTCCTGCCCCc

Function

NR:

description
Transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU624876 True 349 lncRNA 0.48 1 82115392 82115740

Neighbor

gene id symbol gene type direction distance location
LOC118964938 LOC106562620 coding upstream 7940 82022011 ~ 82107452 (+)
LOC110506160 LOC106562619 coding upstream 95869 81944654 ~ 82019523 (+)
cdkn2aip LOC106587807 coding upstream 226693 81883393 ~ 81888699 (+)
trnap-ugg-9 NA coding upstream 246069 81869250 ~ 81869323 (+)
LOC110506150 LOC106562517 coding upstream 254894 81815343 ~ 81860498 (+)
LOC110526975 LOC106562727 coding downstream 13029 82128769 ~ 82198551 (+)
trnaa-ugc-18 NA coding downstream 33979 82149719 ~ 82149795 (+)
LOC110526669 hypk coding downstream 136112 82251852 ~ 82253308 (+)
LOC118965047 LOC106587629 coding downstream 160317 82276057 ~ 82276380 (+)
vps33b LOC106562628 coding downstream 191804 82307544 ~ 82318126 (+)
G551721 NA non-coding upstream 1036 82112035 ~ 82114356 (+)
G551684 NA non-coding upstream 206660 81908493 ~ 81908732 (+)
G551683 NA non-coding upstream 209163 81905634 ~ 81906229 (+)
G551678 NA non-coding upstream 235250 81878909 ~ 81880142 (+)
G551675 NA non-coding upstream 242776 81872393 ~ 81872616 (+)
G551770 NA non-coding downstream 38888 82154628 ~ 82155340 (+)
G551804 NA non-coding downstream 148055 82263795 ~ 82264106 (+)
G551848 NA non-coding downstream 269177 82384917 ~ 82385727 (+)
G551851 NA non-coding downstream 273708 82389448 ~ 82391425 (+)
G551863 NA non-coding downstream 305225 82420965 ~ 82421244 (+)
LOC110526107 scg3 other upstream 649194 81435094 ~ 81466198 (+)
G551043 NA other upstream 1193956 80920707 ~ 80921436 (+)
myef2 myef2 other upstream 1684463 80415414 ~ 80430972 (+)
G551805 NA other downstream 149229 82264969 ~ 82265749 (+)
G551889 LOC106587688 other downstream 361178 82476918 ~ 82483802 (+)
LOC110526694 pcsk6 other downstream 473797 82532518 ~ 82627600 (+)
G551950 NA other downstream 474828 82590568 ~ 82593162 (+)

Expression


Co-expression Network