Gene
RNA
| Item | Value |
|---|---|
| gene id | G551863 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 82420965 ~ 82421244 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU624994 | True | 280 | lncRNA | 0.49 | 1 | 82420965 | 82421244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526689 | spg21 | coding | upstream | 334 | 82413517 ~ 82420631 (+) |
| LOC110526680 | LOC106562633 | coding | upstream | 55572 | 82362630 ~ 82365393 (+) |
| LOC110526684 | LOC106587700 | coding | upstream | 64964 | 82348809 ~ 82356001 (+) |
| si:ch73-314g15.3 | LOC106562630 | coding | upstream | 77764 | 82331797 ~ 82343201 (+) |
| LOC110526676 | prc1 | coding | upstream | 90592 | 82318325 ~ 82330373 (+) |
| LOC118964942 | NA | coding | downstream | 50762 | 82472006 ~ 82476306 (+) |
| LOC118965048 | LOC106587694 | coding | downstream | 98010 | 82519254 ~ 82529744 (+) |
| LOC110526694 | pcsk6 | coding | downstream | 111274 | 82532518 ~ 82627600 (+) |
| LOC110526983 | tm6sf1 | coding | downstream | 239444 | 82660688 ~ 82672272 (+) |
| sh3gl3a | LOC106583399 | coding | downstream | 393940 | 82815184 ~ 82861792 (+) |
| G551851 | NA | non-coding | upstream | 29540 | 82389448 ~ 82391425 (+) |
| G551848 | NA | non-coding | upstream | 35238 | 82384917 ~ 82385727 (+) |
| G551804 | NA | non-coding | upstream | 156859 | 82263795 ~ 82264106 (+) |
| G551770 | NA | non-coding | upstream | 265625 | 82154628 ~ 82155340 (+) |
| G551752 | NA | non-coding | upstream | 305225 | 82115392 ~ 82115740 (+) |
| G551864 | NA | non-coding | downstream | 113 | 82421357 ~ 82421616 (+) |
| G551865 | NA | non-coding | downstream | 381 | 82421625 ~ 82422120 (+) |
| G551868 | NA | non-coding | downstream | 3014 | 82424258 ~ 82426367 (+) |
| G551887 | NA | non-coding | downstream | 38708 | 82459952 ~ 82467343 (+) |
| G551893 | NA | non-coding | downstream | 64489 | 82485733 ~ 82486243 (+) |
| G551805 | NA | other | upstream | 155216 | 82264969 ~ 82265749 (+) |
| LOC110526975 | LOC106562727 | other | upstream | 223297 | 82128769 ~ 82198551 (+) |
| LOC118964938 | LOC106562620 | other | upstream | 360550 | 82022011 ~ 82107452 (+) |
| LOC110506150 | LOC106562517 | other | upstream | 560707 | 81815343 ~ 81860498 (+) |
| LOC110526107 | scg3 | other | upstream | 954767 | 81435094 ~ 81466198 (+) |
| G551889 | LOC106587688 | other | downstream | 55674 | 82476918 ~ 82483802 (+) |
| G551950 | NA | other | downstream | 169324 | 82590568 ~ 82593162 (+) |
| G552080 | NA | other | downstream | 493386 | 82914630 ~ 82915052 (+) |
| LOC110506168 | efl1 | other | downstream | 847925 | 83183382 ~ 83285498 (+) |
