Gene
RNA
| Item | Value |
|---|---|
| gene id | G552530 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 82526313 ~ 82526539 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU625827 | True | 227 | lncRNA | 0.33 | 1 | 82526313 | 82526539 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526691 | LOC106562597 | coding | downstream | 20331 | 82481559 ~ 82505982 (-) |
| LOC110526982 | ankdd1a | coding | downstream | 81335 | 82426094 ~ 82444978 (-) |
| LOC110526686 | LOC106562638 | coding | downstream | 118048 | 82389441 ~ 82408265 (-) |
| LOC110526981 | LOC106562637 | coding | downstream | 140559 | 82382159 ~ 82385754 (-) |
| LOC118936662 | LOC106562636 | coding | downstream | 144302 | 82366807 ~ 82382011 (-) |
| LOC110526698 | LOC106562729 | coding | upstream | 120184 | 82646723 ~ 82657356 (-) |
| LOC110526699 | LOC106587711 | coding | upstream | 152063 | 82678602 ~ 82692385 (-) |
| bnc1 | LOC106592271 | coding | upstream | 177748 | 82704287 ~ 82730677 (-) |
| LOC110506861 | LOC106562717 | coding | upstream | 338712 | 82865251 ~ 82868643 (-) |
| LOC110506862 | LOC106562715 | coding | upstream | 360886 | 82887425 ~ 82907933 (-) |
| G552526 | NA | non-coding | downstream | 4402 | 82521594 ~ 82521911 (-) |
| G552520 | NA | non-coding | downstream | 8598 | 82517496 ~ 82517715 (-) |
| G552518 | NA | non-coding | downstream | 9576 | 82516400 ~ 82516737 (-) |
| G552501 | NA | non-coding | downstream | 58360 | 82466503 ~ 82467953 (-) |
| G552499 | NA | non-coding | downstream | 69279 | 82456310 ~ 82457034 (-) |
| G552539 | NA | non-coding | upstream | 16221 | 82542760 ~ 82543219 (-) |
| G552548 | NA | non-coding | upstream | 31554 | 82558093 ~ 82558602 (-) |
| G552568 | NA | non-coding | upstream | 75264 | 82601803 ~ 82603503 (-) |
| G552558 | NA | non-coding | upstream | 86139 | 82612678 ~ 82620244 (-) |
| G552576 | NA | non-coding | upstream | 107382 | 82633921 ~ 82634150 (-) |
| cartl | LOC106562433 | other | downstream | 586781 | 81936960 ~ 81939563 (-) |
| LOC110519456 | cart | other | downstream | 632200 | 81893009 ~ 81894165 (-) |
| LOC110506838 | tubgcp4 | other | downstream | 643082 | 81860488 ~ 81883263 (-) |
| G552533 | pcsk6 | other | upstream | 37919 | 82564458 ~ 82566619 (-) |
| G552571 | NA | other | upstream | 83379 | 82609918 ~ 82617194 (-) |
| G552584 | LOC106587709 | other | upstream | 138938 | 82665477 ~ 82666445 (-) |
| G552980 | NA | other | upstream | 818662 | 83345201 ~ 83373196 (-) |
