G552533 (pcsk6)


Basic Information

Item Value
gene id G552533
gene name pcsk6
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 82564458 ~ 82566619 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU625831
gtgtgtgtgtgtgtgtgtgtgtgtgtccagtagaACAAGGAATTGTTTGAGCTCTATTCATTAAGAGTTCTATCTGAAACATTCTGAATGCTTCACCAAATATACCACAGCCCTCCTGAATGGGTATTTGaacgtttttttaaatgttttccaaACGTTACAGGTTGTCTTGGCACAAAGGGAACCACATAACCGCTGCTTCCTCACCTGGTACGTCGTTCAGACATCCTAGTACAGGTGTGCTGGGTAGGAACACTCCTCCACTTCTTAGCCTCCACCACCATACCCTCCGCATCCACCAGCCCAAAGCCATACAGGTGActcaCTCTGTGTCCGGCTGCGTTGGTCTTCCAGTCGTTGGCCTTCAGGTGGACAGGCCTGGACGTCTTGACCAGCAGGTGCTGGATATCTCTCCAGCTGACCAATGGGCTGGAACAACATAAATAAATGTGTTGCAGCGTGCCCTGATGAACACGACCCAATACATCCAGTTTTCATGACTTAGCTTGTGGTTTGGTTTGTGCCCAGGTCTTAAGAAAATCACAAAGAAGGCAGTAAGAAATGACAGCTGTTTACCCATATTGTTTTCCTTATACAGTATGGCCAAAAGTAGAAAACTATAGAAATAAGTCAAATGTATTTGCACAAGTCACTCACAAATAGTTTGACGTTTTACTTCATTTAAATCATTTAGAAGATCAATTCGCTCATTAAAATCTGATGTAGAGCGATCAAATGAAATGTACCCCATTCTGCAGTCGTATCATTGTGTATCATTGTCTAATTGTGTATTAAgcacgtaattagagcagtaaaaatgaaTGTTTTGTCAAACCCGTGATCTCCCACGGCTGTCAGCCTGGCAGCATTCAGGctccaaccacccagtttataattgagTATTACGCACATAGTCTATATCCAGGGCTCCTCCCACTGTCTAG

Function

symbol description
pcsk6 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Orthologous to human PCSK6 (proprotein convertase subtilisin/kexin type 6).

NR:

description
PREDICTED: proprotein convertase subtilisin/kexin type 6 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU625831 True 944 TUCP 0.44 2 82564458 82566619
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110526691 LOC106562597 coding downstream 58476 82481559 ~ 82505982 (-)
LOC110526982 ankdd1a coding downstream 119480 82426094 ~ 82444978 (-)
LOC110526686 LOC106562638 coding downstream 156193 82389441 ~ 82408265 (-)
LOC110526981 LOC106562637 coding downstream 178704 82382159 ~ 82385754 (-)
LOC118936662 LOC106562636 coding downstream 182447 82366807 ~ 82382011 (-)
LOC110526698 LOC106562729 coding upstream 80104 82646723 ~ 82657356 (-)
LOC110526699 LOC106587711 coding upstream 111983 82678602 ~ 82692385 (-)
bnc1 LOC106592271 coding upstream 137668 82704287 ~ 82730677 (-)
LOC110506861 LOC106562717 coding upstream 298632 82865251 ~ 82868643 (-)
LOC110506862 LOC106562715 coding upstream 320806 82887425 ~ 82907933 (-)
G552548 NA non-coding downstream 5856 82558093 ~ 82558602 (-)
G552539 NA non-coding downstream 21239 82542760 ~ 82543219 (-)
G552530 NA non-coding downstream 37919 82526313 ~ 82526539 (-)
G552526 NA non-coding downstream 42547 82521594 ~ 82521911 (-)
G552520 NA non-coding downstream 46743 82517496 ~ 82517715 (-)
G552568 NA non-coding upstream 35184 82601803 ~ 82603503 (-)
G552558 NA non-coding upstream 46059 82612678 ~ 82620244 (-)
G552576 NA non-coding upstream 67302 82633921 ~ 82634150 (-)
G552607 NA non-coding upstream 162988 82729607 ~ 82729907 (-)
cartl LOC106562433 other downstream 624926 81936960 ~ 81939563 (-)
LOC110519456 cart other downstream 670345 81893009 ~ 81894165 (-)
LOC110506838 tubgcp4 other downstream 681227 81860488 ~ 81883263 (-)
G552571 NA other upstream 43299 82609918 ~ 82617194 (-)
G552584 LOC106587709 other upstream 98858 82665477 ~ 82666445 (-)
G552980 NA other upstream 778582 83345201 ~ 83373196 (-)
G553491 NA other upstream 1309595 83876214 ~ 83879504 (-)

Expression

G552533(pcsk6) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G552533(pcsk6) Expression in each Bioproject

Bar chart with 13 bars.
G552533(pcsk6) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
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Co-expression Network