Gene
RNA
| Item | Value |
|---|---|
| gene id | G552080 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 82914630 ~ 82915052 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU625255 | True | 423 | TUCP | 0.48 | 1 | 82914630 | 82915052 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506164 | LOC106562716 | coding | upstream | 27208 | 82877997 ~ 82887422 (+) |
| sh3gl3a | LOC106583399 | coding | upstream | 52838 | 82815184 ~ 82861792 (+) |
| LOC110526983 | tm6sf1 | coding | upstream | 242358 | 82660688 ~ 82672272 (+) |
| LOC110526694 | pcsk6 | coding | upstream | 287030 | 82532518 ~ 82627600 (+) |
| LOC118965048 | LOC106587694 | coding | upstream | 384886 | 82519254 ~ 82529744 (+) |
| LOC110506865 | LOC106594052 | coding | downstream | 4896 | 82919948 ~ 83169938 (+) |
| LOC110506168 | efl1 | coding | downstream | 268330 | 83183382 ~ 83285498 (+) |
| LOC118964943 | NA | coding | downstream | 397572 | 83312624 ~ 83323371 (+) |
| LOC118936663 | mex3b | coding | downstream | 430667 | 83345719 ~ 83350278 (+) |
| LOC118964946 | LOC106587880 | coding | downstream | 607408 | 83522460 ~ 83525959 (+) |
| G552077 | NA | non-coding | upstream | 4390 | 82910036 ~ 82910240 (+) |
| G552023 | NA | non-coding | upstream | 22912 | 82890955 ~ 82891718 (+) |
| G552065 | NA | non-coding | upstream | 40540 | 82873367 ~ 82874090 (+) |
| G552016 | NA | non-coding | upstream | 49827 | 82863541 ~ 82864803 (+) |
| G552025 | NA | non-coding | upstream | 58889 | 82854288 ~ 82855741 (+) |
| G552134 | NA | non-coding | downstream | 141564 | 83056616 ~ 83057054 (+) |
| G552138 | NA | non-coding | downstream | 157953 | 83073005 ~ 83073430 (+) |
| G552141 | NA | non-coding | downstream | 255525 | 83170577 ~ 83172928 (+) |
| G552802 | NA | non-coding | downstream | 306468 | 83221520 ~ 83221979 (+) |
| G551950 | NA | other | upstream | 321468 | 82590568 ~ 82593162 (+) |
| G551889 | LOC106587688 | other | upstream | 430828 | 82476918 ~ 82483802 (+) |
| G551805 | NA | other | upstream | 648881 | 82264969 ~ 82265749 (+) |
| LOC110526975 | LOC106562727 | other | upstream | 716962 | 82128769 ~ 82198551 (+) |
| LOC110506171 | tmc3 | other | downstream | 681957 | 83568391 ~ 83629334 (+) |
| LOC110526987 | star5 | other | downstream | 719309 | 83633613 ~ 83646883 (+) |
| G553218 | mesd1 | other | downstream | 821824 | 83736876 ~ 83738690 (+) |
| G553959 | NA | other | downstream | 1782787 | 84697839 ~ 84700192 (+) |
