Gene
RNA
| Item | Value |
|---|---|
| gene id | G552742 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 83074040 ~ 83074828 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| probable JmjC domain-containing histone demethylation protein 2C, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU626086 | True | 307 | lncRNA | 0.44 | 2 | 83074040 | 83074828 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506862 | LOC106562715 | coding | downstream | 166107 | 82887425 ~ 82907933 (-) |
| LOC110506861 | LOC106562717 | coding | downstream | 205397 | 82865251 ~ 82868643 (-) |
| bnc1 | LOC106592271 | coding | downstream | 343363 | 82704287 ~ 82730677 (-) |
| LOC110526699 | LOC106587711 | coding | downstream | 381655 | 82678602 ~ 82692385 (-) |
| LOC110526698 | LOC106562729 | coding | downstream | 416684 | 82646723 ~ 82657356 (-) |
| LOC110512367 | LOC106562561 | coding | upstream | 98639 | 83173467 ~ 83183368 (-) |
| LOC110506170 | NA | coding | upstream | 454512 | 83529340 ~ 83542546 (-) |
| LOC100136088 | LOC106587743 | coding | upstream | 572443 | 83647271 ~ 83704964 (-) |
| LOC110526710 | mesd1 | coding | upstream | 662008 | 83736836 ~ 83738715 (-) |
| LOC118964944 | cemip | coding | upstream | 681395 | 83756223 ~ 83912000 (-) |
| G552706 | NA | non-coding | downstream | 51982 | 82961246 ~ 83022058 (-) |
| G552711 | NA | non-coding | downstream | 93277 | 82979106 ~ 82980763 (-) |
| G552707 | NA | non-coding | downstream | 100932 | 82971487 ~ 82973108 (-) |
| G552671 | NA | non-coding | downstream | 196940 | 82876850 ~ 82877100 (-) |
| G552777 | NA | non-coding | upstream | 95720 | 83170548 ~ 83172967 (-) |
| G552779 | NA | non-coding | upstream | 104084 | 83178912 ~ 83179347 (-) |
| G552901 | NA | non-coding | upstream | 116447 | 83191275 ~ 83208509 (-) |
| G552958 | NA | non-coding | upstream | 227226 | 83302054 ~ 83302259 (-) |
| G552584 | LOC106587709 | other | downstream | 407595 | 82665477 ~ 82666445 (-) |
| G552558 | NA | other | downstream | 453796 | 82612678 ~ 82620244 (-) |
| G552571 | NA | other | downstream | 456846 | 82609918 ~ 82617194 (-) |
| G552533 | pcsk6 | other | downstream | 507421 | 82564458 ~ 82566619 (-) |
| LOC110526691 | LOC106562597 | other | downstream | 568277 | 82481559 ~ 82505982 (-) |
| G552980 | NA | other | upstream | 270373 | 83345201 ~ 83373196 (-) |
| G553491 | NA | other | upstream | 801386 | 83876214 ~ 83879504 (-) |
| LOC110526720 | LOC106562647 | other | upstream | 860033 | 83925574 ~ 83954299 (-) |
| G553707 | NA | other | upstream | 1023184 | 84098012 ~ 84175022 (-) |
| G554191 | NA | other | upstream | 1577259 | 84652087 ~ 84652416 (-) |
