Gene
RNA
| Item | Value |
|---|---|
| gene id | G553491 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 83876214 ~ 83879504 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Nuclear factor 1 A-type |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU626966 | False | 471 | TUCP | 0.44 | 2 | 83876214 | 83879504 |
| TU626967 | False | 450 | TUCP | 0.44 | 2 | 83877777 | 83879504 |
| TU626965 | True | 431 | TUCP | 0.45 | 2 | 83878708 | 83879504 |
83,875,000
83,876,000
83,877,000
83,878,000
83,879,000
83,880,000
83,881,000
83,882,000
83,883,000
83,884,000
83,885,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526992 | NA | coding | downstream | 7515 | 83866408 ~ 83868699 (-) |
| LOC110526710 | mesd1 | coding | downstream | 137499 | 83736836 ~ 83738715 (-) |
| LOC100136088 | LOC106587743 | coding | downstream | 171250 | 83647271 ~ 83704964 (-) |
| LOC110506170 | NA | coding | downstream | 333668 | 83529340 ~ 83542546 (-) |
| LOC110512367 | LOC106562561 | coding | downstream | 692846 | 83173467 ~ 83183368 (-) |
| LOC110526720 | LOC106562647 | coding | upstream | 46070 | 83925574 ~ 83954299 (-) |
| LOC110526723 | arnt2 | coding | upstream | 98900 | 83978404 ~ 84089424 (-) |
| LOC110506870 | fah | coding | upstream | 346757 | 84226261 ~ 84250541 (-) |
| LOC110506882 | LOC106562652 | coding | upstream | 371492 | 84250996 ~ 84267954 (-) |
| LOC118964949 | NA | coding | upstream | 398751 | 84278255 ~ 84278855 (-) |
| G553472 | NA | non-coding | downstream | 15094 | 83859974 ~ 83861120 (-) |
| G553441 | NA | non-coding | downstream | 32622 | 83786072 ~ 83843592 (-) |
| G553451 | NA | non-coding | downstream | 68493 | 83803080 ~ 83807721 (-) |
| G553436 | NA | non-coding | downstream | 115777 | 83759383 ~ 83760437 (-) |
| G553428 | LOC106562689 | non-coding | downstream | 128417 | 83746765 ~ 83747797 (-) |
| G553494 | NA | non-coding | upstream | 133 | 83879637 ~ 83880341 (-) |
| G553514 | NA | non-coding | upstream | 34514 | 83914018 ~ 83914255 (-) |
| G553516 | NA | non-coding | upstream | 40527 | 83920031 ~ 83920237 (-) |
| G553529 | NA | non-coding | upstream | 75434 | 83954938 ~ 83955223 (-) |
| G553547 | NA | non-coding | upstream | 90096 | 83969600 ~ 83969846 (-) |
| G552980 | NA | other | downstream | 503018 | 83345201 ~ 83373196 (-) |
| G552584 | LOC106587709 | other | downstream | 1209769 | 82665477 ~ 82666445 (-) |
| G552558 | NA | other | downstream | 1255970 | 82612678 ~ 82620244 (-) |
| G552571 | NA | other | downstream | 1259020 | 82609918 ~ 82617194 (-) |
| G552533 | pcsk6 | other | downstream | 1309595 | 82564458 ~ 82566619 (-) |
| G553707 | NA | other | upstream | 218508 | 84098012 ~ 84175022 (-) |
| G554191 | NA | other | upstream | 772583 | 84652087 ~ 84652416 (-) |
| LOC110517996 | cers3 | other | upstream | 834204 | 84699131 ~ 84727986 (-) |
| G554286 | LOC106591282 | other | upstream | 1020864 | 84900368 ~ 84914202 (-) |
