G553707


Basic Information

Item Value
gene id G553707
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 84098012 ~ 84175022 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU627232
GCAGTTTACAGGGTGAAGGAGTAGACACAGACTGTAACGCGTCCAGACCATGGTTGATTGTCACCCAGTCCAGCGCTTCTCAAGTACTGACTGATACCAGACAATAGATGTGTTGACAGGCAGTGTTACTGTTTGGGACCATaactctcttcacctctcttctactctcctctctggtcaagctctcctctcttctcctctcttctactctcctctctggtcaagctctcctctcttctcctctcttctcctctcctctctggtcaagctctcctctcttctcctctcctctctggtcaagctctcctctcttctcctctcctttcttttgtgcgtgtgcgtgtttacCCACACTTGCGTTCATGTGCATGTCCCTACGTGCCTATGCGTCTGCACCCTCACAGGTGTGGCTATATGTGTAACAGCACAGCTTGTTCCCCGCTAGTCATCCAGGTGCTGCTCTTCCCAGGTGGAGGTGGGTATAGCGCTGTAGGGGTCCATGATGACCCGGGCACAGCGGATGATCATGGCCACCAGGAGAAGGCAGAGGAAGGCCACACAGGCCAGCGTCATGCCCTGGTCCACATCCACAAACTCTGGGTCGGGAGTGGCCCCCTCCTCCatgcctgctgctgctgctggcgtTGGGTCTCTATGTTGTCACTGTCCTccgccgcacacacacacacctctaccatCCTGAGAATGGATCTtaaccagtCGGAATTAATGCCTCAAATTTAC

Function

NR:

description
cortexin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU627232 True 744 TUCP 0.54 3 84098012 84175022
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110526723 arnt2 coding downstream 8588 83978404 ~ 84089424 (-)
LOC110526720 LOC106562647 coding downstream 143713 83925574 ~ 83954299 (-)
LOC118964944 cemip coding downstream 186012 83756223 ~ 83912000 (-)
LOC110526992 NA coding downstream 229313 83866408 ~ 83868699 (-)
LOC110526710 mesd1 coding downstream 359297 83736836 ~ 83738715 (-)
LOC110506870 fah coding upstream 51239 84226261 ~ 84250541 (-)
LOC110506882 LOC106562652 coding upstream 75974 84250996 ~ 84267954 (-)
LOC118964949 NA coding upstream 103233 84278255 ~ 84278855 (-)
LOC118964948 NA coding upstream 103875 84278897 ~ 84280568 (-)
LOC110512412 LOC106562588 coding upstream 190667 84363849 ~ 84413230 (-)
G553635 NA non-coding downstream 18678 84078860 ~ 84079334 (-)
G553632 NA non-coding downstream 31699 84065984 ~ 84066313 (-)
G553617 NA non-coding downstream 81877 84012266 ~ 84016135 (-)
G553615 NA non-coding downstream 93990 84003746 ~ 84004022 (-)
G553734 LOC106562659 non-coding upstream 31400 84206422 ~ 84209097 (-)
G553748 NA non-coding upstream 66388 84241410 ~ 84244889 (-)
G553749 NA non-coding upstream 69939 84244961 ~ 84246256 (-)
G553754 NA non-coding upstream 100408 84275430 ~ 84275813 (-)
G553756 NA non-coding upstream 102470 84277492 ~ 84280533 (-)
G553491 NA other downstream 218508 83876214 ~ 83879504 (-)
G552980 NA other downstream 724816 83345201 ~ 83373196 (-)
G552584 LOC106587709 other downstream 1431567 82665477 ~ 82666445 (-)
G552558 NA other downstream 1477768 82612678 ~ 82620244 (-)
G554191 NA other upstream 477065 84652087 ~ 84652416 (-)
LOC110517996 cers3 other upstream 538686 84699131 ~ 84727986 (-)
G554286 LOC106591282 other upstream 725346 84900368 ~ 84914202 (-)
G554658 NA other upstream 1035732 85210754 ~ 85211990 (-)
G554679 NA other upstream 1065977 85240999 ~ 85317114 (-)

Expression

G553707 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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G553707 Expression in each Bioproject

Bar chart with 11 bars.
G553707 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
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Co-expression Network