Gene
RNA
| Item | Value |
|---|---|
| gene id | G554219 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 84746680 ~ 84747754 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU627881 | False | 951 | lncRNA | 0.44 | 1 | 84746680 | 84747630 |
| TU627880 | True | 516 | lncRNA | 0.48 | 1 | 84747239 | 84747754 |
84,744,800
84,745,200
84,745,600
84,746,000
84,746,400
84,746,800
84,747,200
84,747,600
84,748,000
84,748,000
84,748,400
84,748,800
84,749,200
84,749,600
84,750,000
84,750,400
84,750,800
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517994 | LOC106587824 | coding | downstream | 12694 | 84728501 ~ 84733986 (-) |
| LOC110517996 | cers3 | coding | downstream | 18694 | 84699131 ~ 84727986 (-) |
| LOC110506177 | LOC106562591 | coding | downstream | 56841 | 84478032 ~ 84689839 (-) |
| LOC110512412 | LOC106562588 | coding | downstream | 333450 | 84363849 ~ 84413230 (-) |
| LOC110514692 | chsy1 | coding | upstream | 247112 | 84994866 ~ 85084084 (-) |
| LOC110514693 | sels | coding | upstream | 336875 | 85084629 ~ 85092097 (-) |
| LOC110506187 | tecta | coding | upstream | 383800 | 85131554 ~ 85150613 (-) |
| LOC110506917 | NA | coding | upstream | 528463 | 85276217 ~ 85278538 (-) |
| LOC110513177 | kiaa1549l | coding | upstream | 584268 | 85332022 ~ 85482833 (-) |
| G554217 | NA | non-coding | downstream | 6146 | 84740265 ~ 84740534 (-) |
| G554216 | NA | non-coding | downstream | 6854 | 84739555 ~ 84739826 (-) |
| G554201 | NA | non-coding | downstream | 55652 | 84690799 ~ 84691028 (-) |
| G554193 | NA | non-coding | downstream | 87709 | 84658744 ~ 84658971 (-) |
| G554188 | NA | non-coding | downstream | 98942 | 84647467 ~ 84647738 (-) |
| G554221 | NA | non-coding | upstream | 6641 | 84754395 ~ 84754693 (-) |
| G554225 | NA | non-coding | upstream | 25400 | 84773154 ~ 84773391 (-) |
| G554248 | NA | non-coding | upstream | 69999 | 84817753 ~ 84818246 (-) |
| G554278 | NA | non-coding | upstream | 142704 | 84890458 ~ 84891355 (-) |
| G554282 | NA | non-coding | upstream | 147442 | 84895196 ~ 84896031 (-) |
| G554191 | NA | other | downstream | 94264 | 84652087 ~ 84652416 (-) |
| G553707 | NA | other | downstream | 571658 | 84098012 ~ 84175022 (-) |
| LOC110526720 | LOC106562647 | other | downstream | 792450 | 83925574 ~ 83954299 (-) |
| G553491 | NA | other | downstream | 867176 | 83876214 ~ 83879504 (-) |
| G554286 | LOC106591282 | other | upstream | 152614 | 84900368 ~ 84914202 (-) |
| G554658 | NA | other | upstream | 463000 | 85210754 ~ 85211990 (-) |
| G554679 | NA | other | upstream | 493245 | 85240999 ~ 85317114 (-) |
| LOC110506192 | LOC106593648 | other | upstream | 856662 | 85604261 ~ 85643457 (-) |
| G554819 | NA | other | upstream | 882822 | 85630576 ~ 85632687 (-) |
