G554363


Basic Information

Item Value
gene id G554363
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 85088904 ~ 85089527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU628052
CATGGTCTATGTACGGTTCGTCCATGGTCTATGTGCGGTCCGTCTATGTGAAAGGTGTCACTTTATACCTGTTGTTGTTTCAGCCTGAAGAGGGCCGCCTTGGCATCCAGCTCCTCCTGCATTCTTCTCCTGGACGCCTCCAGTGCCTCTTGTCTCCTCACTACTGCATTGGGATCTTGCACTGCTCCAGACGCCGAGCTGCTCTGTCCCTGGCTGGCTCTCCTCTTGCTCAGGTGCTGGACCACCAGGTAGACCCCCACACACATGAACAACAGATACCATCCATATTCTGCCACCAATG

Function

NR:

description
selenoprotein S-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU628052 True 301 TUCP 0.54 2 85088904 85089527

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-19 NA coding upstream 8380 85080452 ~ 85080524 (+)
LOC110526993 LOC106562571 coding upstream 117330 84819145 ~ 84971574 (+)
LOC118964952 NA coding upstream 177514 84907780 ~ 84911390 (+)
LOC110511357 LOC106562593 coding upstream 273710 84779935 ~ 84815194 (+)
asb7 LOC106562481 coding upstream 344562 84734164 ~ 84744342 (+)
LOC110506910 snrpa1 coding downstream 14621 85104148 ~ 85107300 (+)
LOC110506919 LOC106593804 coding downstream 34664 85124191 ~ 85126313 (+)
LOC110506923 LOC106562745 coding downstream 65501 85155028 ~ 85167703 (+)
LOC118965049 NA coding downstream 93652 85183179 ~ 85184324 (+)
LOC110506925 LOC106591450 coding downstream 98727 85188254 ~ 85197641 (+)
G554102 chsy1 non-coding upstream 4932 85083309 ~ 85083972 (+)
G554099 NA non-coding upstream 12816 85075821 ~ 85076088 (+)
G554078 NA non-coding upstream 58650 85030013 ~ 85030254 (+)
G554043 NA non-coding upstream 164021 84924632 ~ 84924883 (+)
G554364 NA non-coding downstream 262 85089789 ~ 85090001 (+)
G554366 NA non-coding downstream 2224 85091751 ~ 85092652 (+)
G554367 NA non-coding downstream 5175 85094702 ~ 85095052 (+)
G554383 NA non-coding downstream 44044 85133571 ~ 85145753 (+)
G554100 LOC106587790 other upstream 8568 85079852 ~ 85080336 (+)
G554013 NA other upstream 230971 84855908 ~ 84857933 (+)
G553978 NA other upstream 334029 84754423 ~ 84754875 (+)
G553954 NA other upstream 342643 84745607 ~ 84746465 (+)
G554423 NA other downstream 135235 85224762 ~ 85225164 (+)
LOC110526726 pax6 other downstream 714318 85781791 ~ 85806164 (+)
G554907 NA other downstream 723118 85812645 ~ 85814303 (+)
LOC118964953 LOC106594589 other downstream 1082157 86171652 ~ 86291885 (+)

Expression


Co-expression Network