G554423


Basic Information

Item Value
gene id G554423
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 85224762 ~ 85225164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU628138
catccATACCATGCCCTCCTCTGTTCCAGCGAAGGCTAGCTTTCTGTTTTCACTAAcagattgtctctctctccttgtctgtcTCTCGTGTCTCTATCCTCGTTGctttctctcctcgtctctctctctcctcgtcgctctcctcgtctctctctcctcgtcgctctcctcgtctctcttgtctctcctcgtcgctctctctttcctcgtctctctctcctcgcttctCTCTTGCCatgtctcgctctgtgtctcgttCTCCTCGTCTCGCTCTCCTCGTCACGCTCTCCTCGTCACGCTCTCCTCGTCACgctctccccgtctcgctctcctCGTCACGCTCTCCTCGTCTCgctctccccgtctcgctctccccgtctcgctctcctCGTCTCgctctccc

Function

NR:

description
glutamate receptor ionotropic, kainate 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU628138 True 403 TUCP 0.58 1 85224762 85225164

Neighbor

gene id symbol gene type direction distance location
LOC118965050 NA coding upstream 3669 85217690 ~ 85221093 (+)
LOC110506925 LOC106591450 coding upstream 27121 85188254 ~ 85197641 (+)
LOC118965049 NA coding upstream 40438 85183179 ~ 85184324 (+)
LOC110506923 LOC106562745 coding upstream 57059 85155028 ~ 85167703 (+)
LOC110506919 LOC106593804 coding upstream 98449 85124191 ~ 85126313 (+)
LOC110506914 NA coding downstream 68111 85293275 ~ 85303490 (+)
cstf3 cstf3 coding downstream 352948 85578112 ~ 85596032 (+)
wt1b LOC106587831 coding downstream 472259 85697423 ~ 85718907 (+)
LOC110526726 pax6 coding downstream 556627 85781791 ~ 85806164 (+)
LOC110526731 LOC107719794 coding downstream 709514 85934678 ~ 85957181 (+)
G554422 NA non-coding upstream 22 85224508 ~ 85224740 (+)
G554411 NA non-coding upstream 12446 85206209 ~ 85212316 (+)
G554419 NA non-coding upstream 20245 85199694 ~ 85204517 (+)
G554418 NA non-coding upstream 30966 85193195 ~ 85193796 (+)
G554417 NA non-coding upstream 33173 85191184 ~ 85191589 (+)
G554426 NA non-coding downstream 4251 85229415 ~ 85229642 (+)
G554427 NA non-coding downstream 6197 85231361 ~ 85231850 (+)
G554430 NA non-coding downstream 36029 85261193 ~ 85261511 (+)
LOC110506188 LOC106562741 non-coding downstream 47224 85221913 ~ 85273940 (+)
G554415 NA non-coding downstream 50403 85275567 ~ 85325057 (+)
LOC110506910 snrpa1 other upstream 117776 85104148 ~ 85107300 (+)
G554363 NA other upstream 135235 85088904 ~ 85089527 (+)
G554100 LOC106587790 other upstream 144426 85079852 ~ 85080336 (+)
LOC110526993 LOC106562571 other upstream 253212 84819145 ~ 84971574 (+)
G554013 NA other upstream 366829 84855908 ~ 84857933 (+)
G554907 NA other downstream 587481 85812645 ~ 85814303 (+)
LOC118964953 LOC106594589 other downstream 946520 86171652 ~ 86291885 (+)
G555192 NA other downstream 1066914 86292078 ~ 86293881 (+)
LOC118964955 LOC106592958 other downstream 1125782 86350925 ~ 86353193 (+)

Expression


Co-expression Network