Gene
RNA
| Item | Value |
|---|---|
| gene id | G554486 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 85447552 ~ 85452512 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU628205 | True | 303 | lncRNA | 0.50 | 2 | 85447552 | 85452512 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506914 | NA | coding | upstream | 144062 | 85293275 ~ 85303490 (+) |
| LOC110506188 | LOC106562741 | coding | upstream | 173612 | 85221913 ~ 85273940 (+) |
| LOC118965050 | NA | coding | upstream | 226459 | 85217690 ~ 85221093 (+) |
| LOC110506925 | LOC106591450 | coding | upstream | 249911 | 85188254 ~ 85197641 (+) |
| LOC118965049 | NA | coding | upstream | 263228 | 85183179 ~ 85184324 (+) |
| cstf3 | cstf3 | coding | downstream | 125600 | 85578112 ~ 85596032 (+) |
| wt1b | LOC106587831 | coding | downstream | 244911 | 85697423 ~ 85718907 (+) |
| LOC110526726 | pax6 | coding | downstream | 329279 | 85781791 ~ 85806164 (+) |
| LOC110526731 | LOC107719794 | coding | downstream | 482166 | 85934678 ~ 85957181 (+) |
| LOC118965088 | NA | coding | downstream | 616776 | 86069288 ~ 86069806 (+) |
| G554462 | NA | non-coding | upstream | 64103 | 85383185 ~ 85383449 (+) |
| G554461 | NA | non-coding | upstream | 70025 | 85377196 ~ 85377527 (+) |
| G554459 | NA | non-coding | upstream | 72910 | 85374302 ~ 85374642 (+) |
| G554458 | NA | non-coding | upstream | 73411 | 85373907 ~ 85374141 (+) |
| G554415 | NA | non-coding | upstream | 122495 | 85275567 ~ 85325057 (+) |
| G554494 | NA | non-coding | downstream | 8086 | 85460598 ~ 85460810 (+) |
| G554496 | NA | non-coding | downstream | 11921 | 85464433 ~ 85464712 (+) |
| G554500 | NA | non-coding | downstream | 16450 | 85468962 ~ 85469496 (+) |
| G554501 | NA | non-coding | downstream | 17829 | 85470341 ~ 85470586 (+) |
| G554504 | NA | non-coding | downstream | 20308 | 85472820 ~ 85473140 (+) |
| G554423 | NA | other | upstream | 222388 | 85224762 ~ 85225164 (+) |
| LOC110506910 | snrpa1 | other | upstream | 340566 | 85104148 ~ 85107300 (+) |
| G554363 | NA | other | upstream | 358025 | 85088904 ~ 85089527 (+) |
| G554100 | LOC106587790 | other | upstream | 367216 | 85079852 ~ 85080336 (+) |
| LOC110526993 | LOC106562571 | other | upstream | 476002 | 84819145 ~ 84971574 (+) |
| G554907 | NA | other | downstream | 360133 | 85812645 ~ 85814303 (+) |
| LOC118964953 | LOC106594589 | other | downstream | 719172 | 86171652 ~ 86291885 (+) |
| G555192 | NA | other | downstream | 839566 | 86292078 ~ 86293881 (+) |
| LOC118964955 | LOC106592958 | other | downstream | 898434 | 86350925 ~ 86353193 (+) |
