G555606


Basic Information

Item Value
gene id G555606
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 86434941 ~ 86437902 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU629591
CGTTTCACGTCTTTACTTTGTGGCAATGCTGCTGCCTAAACGTGTGCATTGTGCCAATGTTGATGACAGCAAACAGGCTTACCGCACTGTTGTTGCCGATGCAAGTAGCCTTCCAGCCTCCATAGTTCCCACTGGGGTCACTCTGGTACAGCTGGAAGCCGTAGTGTTTGTCCCAGCCCATGTACAGCAGAGACACTCCAAACGGCCTCTTCCCTCCAAACTGTGTGTAGGCCTGTTTGATGTCACACAACGCTGTCACCAACTGCTCACAGGGGATTGGCTCCTGGTATTGCAGTAGATATCTCTGTGCTATTAGCCTCAGCTCATTGGTTAGAACGTTAGCATCGGAGGTGATTCCGGCAACACTGCAAGCCATGTCTTCATTGAGCTTGTAGATCTTCTCTGAGAAGAAAACCTCATCAAGCAGCTTGTGGATGTTCCGTCTCTCTGCAGCCAACAGCACTCCGTCATTGGCTAAAATCCCAAGACATGAGCCGGCGTGGCCAATAGCCTCCATGGCATACTCCACCTGATATAAGCGTCCTTCAGGTGAGAAAATGGTAGTCCGGGAATCATATCTACGAGACATGATTCAGCCTGCCTGTAAAATAAAACCTTAGCTAGCCTGATGTTGTAGTTTGTTGCTGAC

Function

NR:

description
proteasome subunit alpha type-4-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU629591 True 649 TUCP 0.49 7 86434941 86437902

Neighbor

gene id symbol gene type direction distance location
LOC110526738 LOC106587653 coding downstream 2881 86427532 ~ 86432060 (-)
LOC118964956 rabp1 coding downstream 10418 86412450 ~ 86424523 (-)
LOC118964954 NA coding downstream 88202 86341898 ~ 86346739 (-)
elp4 elp4 coding downstream 499934 85812100 ~ 85935007 (-)
LOC110506939 LOC106596505 coding downstream 678613 85741675 ~ 85779604 (-)
LOC110526741 NA coding upstream 1713 86439615 ~ 86447991 (-)
LOC110526766 LOC106562456 coding upstream 112364 86550266 ~ 86555102 (-)
LOC118965097 NA coding upstream 114662 86552564 ~ 86552691 (-)
LOC110506207 LOC106562785 coding upstream 118921 86556823 ~ 86602398 (-)
LOC110506964 LOC106562409 coding upstream 164765 86602667 ~ 86612241 (-)
G555604 NA non-coding downstream 493 86434213 ~ 86434448 (-)
G555602 NA non-coding downstream 15043 86419435 ~ 86419898 (-)
G555599 NA non-coding downstream 22904 86409532 ~ 86412037 (-)
G555596 LOC106587652 non-coding downstream 27060 86407410 ~ 86407881 (-)
G555619 NA non-coding upstream 30832 86468734 ~ 86469158 (-)
G555631 NA non-coding upstream 35145 86473047 ~ 86473260 (-)
G555634 LOC106587654 non-coding upstream 37333 86475235 ~ 86478048 (-)
G555636 NA non-coding upstream 44999 86482901 ~ 86483206 (-)
G555637 NA non-coding upstream 47013 86484915 ~ 86485581 (-)
G555590 LOC106587652 other downstream 41881 86392747 ~ 86393060 (-)
LOC118936664 LOC106562605 other downstream 770687 85642286 ~ 85664291 (-)
G554819 NA other downstream 802254 85630576 ~ 85632687 (-)
LOC110506192 LOC106593648 other downstream 829869 85604261 ~ 85643457 (-)
G555617 NA other upstream 17222 86455124 ~ 86457965 (-)
LOC110506946 LOC106562772 other upstream 1020075 87456447 ~ 87498104 (-)
LOC110513865 LOC106562791 other upstream 1108687 87546236 ~ 87693072 (-)
LOC110526751 LOC106562707 other upstream 1335345 87773201 ~ 87860425 (-)

Expression

G555606 Expression in all Baseline Samples

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G555606 Expression in each Bioproject

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G555606 Expression in each Sample
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Co-expression Network