G555617


Basic Information

Item Value
gene id G555617
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 86455124 ~ 86457965 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU629608
gattagtcctctatatctctctctgtttttgtttctgtctttgtcggattcttgtttgtgttgttcatgcctgaaccagactatcgtcatgtttgctgcaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacgtttgttttgttattaaagaagctctgtttacgttaagtcgcttttgggtcctcattcacgcaccgtaacaccacCAGTTATGGTGATGCTTCATGTCATCACAAACAAAGTATTTGGCACATTTTCAGATGGAGGTACTTACACATTTGCCAACTCGTCCACGTTCAACGTTTTGAATTTCATAGCTAAACAATCAAAAACGTAGATATCCTGAGGAGATCCTTTTTGTTTACAGATGTAAACACCAAGGTTATCTGTCAAGGAGAGGCATTTGTTAAAATACAACAAACAAGTATTTCTCCAAAAACAACCTGCAACCAATCATTAGATGACAACCAAATGACGATAATAGTCCAGCTTTCACAATAACGAGACAGCCGAGGCAGAACCGTTATATTCTTCTAAAACGGATCATAACTCACAAATAAGTAGAGCCCACTCAAAAATATAAACACTACTTATGTTTCAGAGCACACAGTAAAGTTTAAAATGGTTCAAAtatttattgtgtgtttttgttctacttgactttatagtactactgatattgattactgcatcgTTGGGAAAGAGCTTGCAATGAAGTCAtgtcactgtacttgtgcacgtgacaataCAACTTGAAATGACACCAACACAGACTTTGAGGCGTCCTTCAAGAGGCCTGGGTTCAGTCCAAAATATCACACATTGGATAACTTGAGTTAATTATTTCCCAATAATTATTTTAGATTTGCAAATTTATGTTAACATCCTTCCCCCTAAGGAAATTTAAATAGATTATTGCAGGAATATCTAAAACATTGGCCAAATTCAAACGGAAAGTCCCTGATACATTAGGAAACAAGGCCCAGTACTTTCTTGACTACAAACTTTCTTTACCCAACCGTGGAACAGACTGTTTGTTCCCAGACTCGGGactctctctattggttacacagacttttggactcccatcctattctaaccacctctcactggctttgtattcatgttacctgatgaaattgctgtacaaaaTGATCTTGTTAACATCTcatgcacattcagatgtcataaatcagcacggcagagctctccctgtactATGCCGTGCCtggattgtattactgttgatgatatctggaatgtgcatgtacaccctggcccatctactgttgccaGCCCcgattctgacttgtgctctgatatctgcttcactgatttctgatCTCGTAAAAGCCTAGGTTTTCTGCATGTTAACACTAAAAGCTTATTACCTAAATGAATCAAGTGTgagttcacagctccaatccagatgtgttggtaattactgagacgtggttaagaaagagtgttttgaacactgatgttaacctttctggctATAACCTTTTTTCAgtaagacagatcttccaaaggtggggacagatcttccaaagtgttgatctttaccaaggatcaccttcagcactcggttgtctccaccaagtctgtccccaaacaatttgatttgctcgttttaagcattaaactttcaaatagttctttgttgactgttgctgggtgccattgtcctccatcagcaccagcctgtaccctacctgccctaagctctctcctggccccttagactaggtctgaatttgtcctgctaggtgacctaaactgggacatgcttaaaccccctgaccaagtcctaaatcAATGAGACTCCCTAAATATTTCTCAGATTATCAACAATCCTACAAgatatgactccaaacacccagaaaaggctactctccttgatgttatcctcacaaataatccttaTAGgaatcagtctggtgttttctgtaatgaccttagtgatccctgttttacagcctgtgttcgtaatggctgctcagggAAACGACCTGTCCttatttgtcatagacgcttgctaaaactttaatgagcaagccttccttcatgaactggcctctgtgaAATGGTATGGAATCAGcatgatcccctctgtcgaagacgcttggaccttcttttttgatattttcagtggtattgttaacaaacacgcccgcataaagaaaatgagaattaaaaacaggttcagcccctggttcgaccgtgatcttgcagagttactccacctcaagaattgcatttggtgaaaggctctgcacacgcatactcaggctgactggttattgttcaggcaaatgagaaataagtgcactcaggctatccggaaggccaaagttagttactttaaggagcagttctctctctgtgggtctaaccccaagaagttctggaaaacagttaaagacctggagaataaaccctcctcctcacagctgcccatgtcccttaatgttcatgatgtggttgttactgacaagaagcacatggctgagctctttaatcaccacttcattaagtcaggattcctatttgactcagccatgcctccttgcccgtccaacatttcctcatcttccaccccttctaatgtgactatccccaattcttctccctcttttccccctgccctgctataaagtttctccctgcaggcagtcactgagtccgaggtgcctAAACtgcttaaacttgaccccaaaaaaacatctagGTCAGATGGTTTataccctttcttctttaaggttgctgcccctatcatcaccaagcctgtctctcctttctggggaggttcccattgcttggaaggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU629608 True 2842 TUCP 0.42 1 86455124 86457965

Neighbor

gene id symbol gene type direction distance location
LOC110526741 NA coding downstream 7133 86439615 ~ 86447991 (-)
LOC110526738 LOC106587653 coding downstream 23064 86427532 ~ 86432060 (-)
LOC118964956 rabp1 coding downstream 30601 86412450 ~ 86424523 (-)
LOC118964954 NA coding downstream 108385 86341898 ~ 86346739 (-)
elp4 elp4 coding downstream 520117 85812100 ~ 85935007 (-)
LOC110526766 LOC106562456 coding upstream 92301 86550266 ~ 86555102 (-)
LOC118965097 NA coding upstream 94599 86552564 ~ 86552691 (-)
LOC110506207 LOC106562785 coding upstream 98858 86556823 ~ 86602398 (-)
LOC110506964 LOC106562409 coding upstream 144702 86602667 ~ 86612241 (-)
LOC110506206 neo1 coding upstream 156825 86614790 ~ 86829756 (-)
G555604 NA non-coding downstream 20676 86434213 ~ 86434448 (-)
G555602 NA non-coding downstream 35226 86419435 ~ 86419898 (-)
G555599 NA non-coding downstream 43087 86409532 ~ 86412037 (-)
G555596 LOC106587652 non-coding downstream 47243 86407410 ~ 86407881 (-)
G555619 NA non-coding upstream 10769 86468734 ~ 86469158 (-)
G555631 NA non-coding upstream 15082 86473047 ~ 86473260 (-)
G555634 LOC106587654 non-coding upstream 17270 86475235 ~ 86478048 (-)
G555636 NA non-coding upstream 24936 86482901 ~ 86483206 (-)
G555637 NA non-coding upstream 26950 86484915 ~ 86485581 (-)
G555606 NA other downstream 17222 86434941 ~ 86437902 (-)
G555590 LOC106587652 other downstream 62064 86392747 ~ 86393060 (-)
LOC110506939 LOC106596505 other downstream 698775 85741675 ~ 85779604 (-)
LOC118936664 LOC106562605 other downstream 790870 85642286 ~ 85664291 (-)
LOC110506946 LOC106562772 other upstream 1000012 87456447 ~ 87498104 (-)
LOC110513865 LOC106562791 other upstream 1088624 87546236 ~ 87693072 (-)
LOC110526751 LOC106562707 other upstream 1315282 87773201 ~ 87860425 (-)
G557663 NA other upstream 2701259 89159224 ~ 89159885 (-)
G558051 NA other upstream 3163383 89621348 ~ 89621755 (-)

Expression


Co-expression Network