Gene
RNA
| Item | Value |
|---|---|
| gene id | G555428 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 86509847 ~ 86510892 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU629376 | True | 836 | lncRNA | 0.37 | 2 | 86509847 | 86510892 |
86,506,400
86,506,800
86,507,200
86,507,600
86,508,000
86,508,400
86,508,800
86,509,200
86,509,600
86,510,000
86,510,400
86,510,800
86,511,200
86,511,600
86,512,000
86,512,400
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964957 | LOC106587654 | coding | upstream | 29020 | 86453107 ~ 86480827 (+) |
| LOC110526739 | LOC106562664 | coding | upstream | 70589 | 86434853 ~ 86439258 (+) |
| LOC110526916 | LOC106587652 | coding | upstream | 97797 | 86389359 ~ 86412050 (+) |
| LOC110526995 | LOC106587650 | coding | upstream | 126286 | 86366145 ~ 86383561 (+) |
| LOC110526102 | LOC106587651 | coding | upstream | 143840 | 86353838 ~ 86366007 (+) |
| LOC110526773 | LOC105014000 | coding | downstream | 2721 | 86513613 ~ 86526922 (+) |
| LOC110526767 | LOC106587658 | coding | downstream | 23569 | 86534461 ~ 86544504 (+) |
| LOC118964958 | senp8 | coding | downstream | 685889 | 87196781 ~ 87199100 (+) |
| LOC110526759 | LOC106562792 | coding | downstream | 1184107 | 87694999 ~ 87697581 (+) |
| st3gal-i | st3gal-i | coding | downstream | 1238164 | 87749056 ~ 87759565 (+) |
| G555418 | NA | non-coding | upstream | 19138 | 86490406 ~ 86490709 (+) |
| G555415 | NA | non-coding | upstream | 23298 | 86485677 ~ 86486549 (+) |
| G555412 | NA | non-coding | upstream | 39553 | 86469989 ~ 86470294 (+) |
| G555411 | NA | non-coding | upstream | 40165 | 86469438 ~ 86469682 (+) |
| G555410 | NA | non-coding | upstream | 40806 | 86468835 ~ 86469041 (+) |
| G555429 | NA | non-coding | downstream | 1059 | 86511951 ~ 86512422 (+) |
| G555439 | NA | non-coding | downstream | 21875 | 86532767 ~ 86533482 (+) |
| G555443 | LOC103042467 | non-coding | downstream | 39375 | 86550267 ~ 86555878 (+) |
| G555453 | NA | non-coding | downstream | 53855 | 86564747 ~ 86565007 (+) |
| G555471 | NA | non-coding | downstream | 77651 | 86588543 ~ 86588895 (+) |
| G555405 | LOC106587654 | other | upstream | 59235 | 86449844 ~ 86450612 (+) |
| LOC118964955 | LOC106592958 | other | upstream | 157963 | 86350925 ~ 86353193 (+) |
| G555192 | NA | other | upstream | 216468 | 86292078 ~ 86293881 (+) |
| LOC118964953 | LOC106594589 | other | upstream | 218637 | 86171652 ~ 86291885 (+) |
| G554907 | NA | other | upstream | 695544 | 85812645 ~ 85814303 (+) |
| G555456 | NA | other | downstream | 58181 | 86569073 ~ 86570234 (+) |
| G556150 | LOC106562774 | other | downstream | 785626 | 87296518 ~ 87296986 (+) |
| LOC110526997 | glce | other | downstream | 1527242 | 88038097 ~ 88121871 (+) |
| LOC110526780 | LOC106562699 | other | downstream | 1638190 | 88149054 ~ 88168508 (+) |
