G556083



Basic Information


Item Value
gene id G556083
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 87149891 ~ 87150126 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU630179
GGTTGCCTCATCATTGTCTGCCTTTGAAGAATAAGGAGCTGTCACAGGGCCTTAGTGTGGGAGCAGCTGGGGGCTACACTGGAGCCCGCTTCAAGGCTCCTGGCACTGCTGTTAGTGTGTGTGCACAGCTTCCtctaatttacacacacacacacacacacacacacacacacacacacacacagatcaactctgtgagggctc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU630179 True 204 lncRNA 0.53 2 87149891 87150126

Neighbor


gene id symbol gene type direction distance location
LOC110506960 LOC106562779 coding downstream 168635 86971824 ~ 86981256 (-)
LOC110506961 NA coding downstream 184266 86947442 ~ 86965625 (-)
LOC110506962 LOC106562712 coding downstream 184564 86963073 ~ 86965327 (-)
LOC110506206 neo1 coding downstream 320135 86614790 ~ 86829756 (-)
LOC110506964 LOC106562409 coding downstream 537650 86602667 ~ 86612241 (-)
LOC110514547 LOC106562775 coding upstream 74557 87224653 ~ 87258522 (-)
LOC110506202 LOC106562774 coding upstream 113471 87262460 ~ 87359594 (-)
LOC110512518 trip4 coding upstream 216226 87366352 ~ 87453975 (-)
LOC110506946 LOC106562772 coding upstream 306321 87456447 ~ 87498104 (-)
LOC118964959 NA coding upstream 366171 87516297 ~ 87520121 (-)
G556074 NA non-coding downstream 11992 87136850 ~ 87137899 (-)
G556072 NA non-coding downstream 18833 87129556 ~ 87131058 (-)
G556067 NA non-coding downstream 26813 87121006 ~ 87123078 (-)
G556065 NA non-coding downstream 30263 87119021 ~ 87119628 (-)
G556026 NA non-coding downstream 126618 87022986 ~ 87023273 (-)
G556120 NA non-coding upstream 60896 87211022 ~ 87221536 (-)
G556196 NA non-coding upstream 109253 87259379 ~ 87260368 (-)
G556198 NA non-coding upstream 111171 87261297 ~ 87261596 (-)
G555617 NA other downstream 691926 86455124 ~ 86457965 (-)
LOC110526741 NA other downstream 702337 86439615 ~ 86447991 (-)
G555606 NA other downstream 711989 86434941 ~ 86437902 (-)
G555590 LOC106587652 other downstream 756831 86392747 ~ 86393060 (-)
LOC110506939 LOC106596505 other downstream 1393542 85741675 ~ 85779604 (-)
LOC110513865 LOC106562791 other upstream 396463 87546236 ~ 87693072 (-)
LOC110526751 LOC106562707 other upstream 623121 87773201 ~ 87860425 (-)
G557663 NA other upstream 2009098 89159224 ~ 89159885 (-)
G558051 NA other upstream 2471222 89621348 ~ 89621755 (-)

Expression



Co-expression Network