Gene
RNA
| Item | Value |
|---|---|
| gene id | G556199 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 87264342 ~ 87264732 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: extensin-1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU630301 | True | 391 | lncRNA | 0.36 | 1 | 87264342 | 87264732 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514547 | LOC106562775 | coding | downstream | 5820 | 87224653 ~ 87258522 (-) |
| LOC110506954 | LOC106562777 | coding | downstream | 67646 | 86984564 ~ 87196696 (-) |
| LOC110506960 | LOC106562779 | coding | downstream | 283086 | 86971824 ~ 86981256 (-) |
| LOC110506961 | NA | coding | downstream | 298717 | 86947442 ~ 86965625 (-) |
| LOC110512518 | trip4 | coding | upstream | 101620 | 87366352 ~ 87453975 (-) |
| LOC110506946 | LOC106562772 | coding | upstream | 191715 | 87456447 ~ 87498104 (-) |
| LOC118964959 | NA | coding | upstream | 251565 | 87516297 ~ 87520121 (-) |
| LOC110513865 | LOC106562791 | coding | upstream | 281504 | 87546236 ~ 87693072 (-) |
| LOC110526758 | call4 | coding | upstream | 437544 | 87702276 ~ 87710764 (-) |
| LOC110506202 | LOC106562774 | non-coding | downstream | 727 | 87262460 ~ 87359594 (-) |
| G556198 | NA | non-coding | downstream | 2746 | 87261297 ~ 87261596 (-) |
| G556196 | NA | non-coding | downstream | 3974 | 87259379 ~ 87260368 (-) |
| G556120 | NA | non-coding | downstream | 42806 | 87211022 ~ 87221536 (-) |
| G556200 | NA | non-coding | upstream | 448 | 87265180 ~ 87265598 (-) |
| G556201 | NA | non-coding | upstream | 1469 | 87266201 ~ 87266919 (-) |
| G556213 | NA | non-coding | upstream | 42076 | 87306808 ~ 87307144 (-) |
| G556215 | NA | non-coding | upstream | 43878 | 87308610 ~ 87308811 (-) |
| G556216 | NA | non-coding | upstream | 44591 | 87309323 ~ 87309543 (-) |
| G555617 | NA | other | downstream | 806377 | 86455124 ~ 86457965 (-) |
| LOC110526741 | NA | other | downstream | 816788 | 86439615 ~ 86447991 (-) |
| G555606 | NA | other | downstream | 826440 | 86434941 ~ 86437902 (-) |
| G555590 | LOC106587652 | other | downstream | 871282 | 86392747 ~ 86393060 (-) |
| LOC110506939 | LOC106596505 | other | downstream | 1507993 | 85741675 ~ 85779604 (-) |
| LOC110526751 | LOC106562707 | other | upstream | 508515 | 87773201 ~ 87860425 (-) |
| G557663 | NA | other | upstream | 1894492 | 89159224 ~ 89159885 (-) |
| G558051 | NA | other | upstream | 2356616 | 89621348 ~ 89621755 (-) |
