G556564


Basic Information

Item Value
gene id G556564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 87761461 ~ 87762158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU630727
acctgctggttactagtccaacgctctaaccacgaggctacctgctggttactagtccaacgctcggttactagtctaaccacgaggctacctgccgctgaCACCGTGGATCACTTTAGTGGATCACTCCACCGCTCCGGGCTAGCAGTAGTGGGTAAATTACTGGGAGGGTCATCGCCTTTTAACTTTGTATTCAGACATTGTAAGATGTTATATAATCCTCCTACTTTTTTCAGTGAAAGTAAATGGATGTGTGTTTAAATGGATGAGCAAAAAAACTTTTTCATTTaatcaggaaactaaaaagatttgacatgggtgctgagatcctcaaaaaggttctacagctgcaacatcaagagcatcctgactggttgtatcactgcctggtacggcaactgctcggcctctgactgcaaggcactacagagggtagtgcatacagcccagtacatcactggggctaagctgcctgccatccaggacctctacaccaggtggtgtcagaggaaggccctaaaaattgtcaaagaccccagccatccattagactgttctctctgcttccgcatggcaagctgtatcggagtgccaagtctaggacaaaaaggcttctcaacagtttttacccccaagccataagactcctgaccaggtaatcaaatggctacccagccTGGTTGCATTGTGTTCCAACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU630727 True 698 lncRNA 0.48 1 87761461 87762158
Loading

Neighbor

gene id symbol gene type direction distance location
st3gal-i st3gal-i coding upstream 1896 87749056 ~ 87759565 (+)
LOC110526759 LOC106562792 coding upstream 63880 87694999 ~ 87697581 (+)
LOC118964958 senp8 coding upstream 562361 87196781 ~ 87199100 (+)
LOC110526767 LOC106587658 coding upstream 1216957 86534461 ~ 86544504 (+)
LOC110526773 LOC105014000 coding upstream 1234539 86513613 ~ 86526922 (+)
LOC110526745 LOC106562700 coding downstream 135323 87897481 ~ 87996337 (+)
LOC118964961 NA coding downstream 219173 87981331 ~ 87986876 (+)
LOC110526997 glce coding downstream 275939 88038097 ~ 88121871 (+)
LOC110526779 LOC106595196 coding downstream 374457 88136615 ~ 88148567 (+)
LOC110526780 LOC106562699 coding downstream 386896 88149054 ~ 88168508 (+)
G556552 NA non-coding upstream 38262 87722745 ~ 87723199 (+)
G556536 NA non-coding upstream 57385 87702281 ~ 87704076 (+)
G556528 NA non-coding upstream 67817 87693374 ~ 87693644 (+)
G556329 LOC106562772 non-coding upstream 303559 87456510 ~ 87457902 (+)
G556276 NA non-coding upstream 341796 87419454 ~ 87419665 (+)
LOC118964960 NA non-coding downstream 68 87759569 ~ 87764850 (+)
G556573 NA non-coding downstream 9115 87771273 ~ 87773332 (+)
G556586 NA non-coding downstream 32321 87794479 ~ 87794790 (+)
G556629 NA non-coding downstream 115691 87877849 ~ 87878485 (+)
G556632 NA non-coding downstream 121155 87883313 ~ 87883525 (+)
G556150 LOC106562774 other upstream 464475 87296518 ~ 87296986 (+)
G555456 NA other upstream 1191227 86569073 ~ 86570234 (+)
G555405 LOC106587654 other upstream 1310849 86449844 ~ 86450612 (+)
LOC118964955 LOC106592958 other upstream 1409577 86350925 ~ 86353193 (+)
G557241 NA other downstream 818171 88580329 ~ 88584055 (+)
G557324 NA other downstream 984145 88746303 ~ 88747223 (+)
G557562 NA other downstream 1272652 89034810 ~ 89035260 (+)

Expression

G556564 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G556564 Expression in each Bioproject

Bar chart with 19 bars.
G556564 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network