Gene
RNA
| Item | Value |
|---|---|
| gene id | G556640 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 87900106 ~ 87901997 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU630852 | False | 245 | lncRNA | 0.50 | 2 | 87900106 | 87900530 |
| TU630850 | True | 360 | lncRNA | 0.34 | 2 | 87901040 | 87901997 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964960 | NA | coding | upstream | 135257 | 87759569 ~ 87764850 (+) |
| st3gal-i | st3gal-i | coding | upstream | 140541 | 87749056 ~ 87759565 (+) |
| LOC110526759 | LOC106562792 | coding | upstream | 202525 | 87694999 ~ 87697581 (+) |
| LOC118964958 | senp8 | coding | upstream | 701006 | 87196781 ~ 87199100 (+) |
| LOC110526767 | LOC106587658 | coding | upstream | 1355602 | 86534461 ~ 86544504 (+) |
| LOC118964961 | NA | coding | downstream | 79334 | 87981331 ~ 87986876 (+) |
| LOC110526997 | glce | coding | downstream | 136100 | 88038097 ~ 88121871 (+) |
| LOC110526779 | LOC106595196 | coding | downstream | 234618 | 88136615 ~ 88148567 (+) |
| LOC110526780 | LOC106562699 | coding | downstream | 247057 | 88149054 ~ 88168508 (+) |
| LOC118965052 | LOC106562560 | coding | downstream | 325789 | 88227768 ~ 88230932 (+) |
| G556634 | NA | non-coding | upstream | 13929 | 87884669 ~ 87886177 (+) |
| G556632 | NA | non-coding | upstream | 16581 | 87883313 ~ 87883525 (+) |
| G556629 | NA | non-coding | upstream | 21621 | 87877849 ~ 87878485 (+) |
| G556586 | NA | non-coding | upstream | 105316 | 87794479 ~ 87794790 (+) |
| G556573 | NA | non-coding | upstream | 126774 | 87771273 ~ 87773332 (+) |
| G556652 | NA | non-coding | downstream | 10583 | 87912580 ~ 87912956 (+) |
| G556666 | NA | non-coding | downstream | 45466 | 87947463 ~ 87948550 (+) |
| G556669 | NA | non-coding | downstream | 49313 | 87951310 ~ 87951871 (+) |
| G556670 | NA | non-coding | downstream | 52887 | 87954884 ~ 87955710 (+) |
| G556675 | NA | non-coding | downstream | 67312 | 87969309 ~ 87970603 (+) |
| G556150 | LOC106562774 | other | upstream | 603120 | 87296518 ~ 87296986 (+) |
| G555456 | NA | other | upstream | 1329872 | 86569073 ~ 86570234 (+) |
| G555405 | LOC106587654 | other | upstream | 1449494 | 86449844 ~ 86450612 (+) |
| LOC118964955 | LOC106592958 | other | upstream | 1548222 | 86350925 ~ 86353193 (+) |
| G557241 | NA | other | downstream | 678332 | 88580329 ~ 88584055 (+) |
| G557324 | NA | other | downstream | 844306 | 88746303 ~ 88747223 (+) |
| G557562 | NA | other | downstream | 1132813 | 89034810 ~ 89035260 (+) |
