Gene
RNA
| Item | Value |
|---|---|
| gene id | G557051 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 88307992 ~ 88308367 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: prespore vesicle protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU631346 | True | 376 | lncRNA | 0.39 | 1 | 88307992 | 88308367 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513137 | LOC106562701 | coding | downstream | 311104 | 87991498 ~ 87996888 (-) |
| LOC110526751 | LOC106562707 | coding | downstream | 447567 | 87773201 ~ 87860425 (-) |
| LOC110526757 | LOC106562769 | coding | downstream | 588234 | 87711280 ~ 87719758 (-) |
| LOC110526758 | call4 | coding | downstream | 597228 | 87702276 ~ 87710764 (-) |
| LOC110513865 | LOC106562791 | coding | downstream | 614920 | 87546236 ~ 87693072 (-) |
| LOC110517398 | tle3 | coding | upstream | 177090 | 88485457 ~ 88531275 (-) |
| uacab | LOC106587861 | coding | upstream | 390146 | 88698513 ~ 88784021 (-) |
| LOC110527001 | mo4l1 | coding | upstream | 493311 | 88801678 ~ 88815746 (-) |
| LOC110526783 | LOC106562667 | coding | upstream | 508704 | 88817071 ~ 88819232 (-) |
| LOC118936482 | LOC105013624 | coding | upstream | 520330 | 88828697 ~ 88951131 (-) |
| G557044 | NA | non-coding | downstream | 13091 | 88294668 ~ 88294901 (-) |
| G557041 | NA | non-coding | downstream | 15544 | 88292212 ~ 88292448 (-) |
| G557028 | NA | non-coding | downstream | 58140 | 88249408 ~ 88249852 (-) |
| G557015 | LOC106562560 | non-coding | downstream | 73077 | 88234021 ~ 88234915 (-) |
| G557012 | LOC106562560 | non-coding | downstream | 77136 | 88227673 ~ 88230856 (-) |
| G557100 | NA | non-coding | upstream | 36730 | 88345097 ~ 88416236 (-) |
| G557106 | NA | non-coding | upstream | 57649 | 88366016 ~ 88366509 (-) |
| G557115 | NA | non-coding | upstream | 88753 | 88397120 ~ 88414101 (-) |
| G557146 | NA | non-coding | upstream | 135506 | 88443873 ~ 88444755 (-) |
| G557207 | NA | non-coding | upstream | 168664 | 88477031 ~ 88477750 (-) |
| LOC110506946 | LOC106562772 | other | downstream | 809900 | 87456447 ~ 87498104 (-) |
| G555617 | NA | other | downstream | 1850027 | 86455124 ~ 86457965 (-) |
| LOC110526741 | NA | other | downstream | 1860438 | 86439615 ~ 86447991 (-) |
| G557663 | NA | other | upstream | 850857 | 89159224 ~ 89159885 (-) |
| G558051 | NA | other | upstream | 1312981 | 89621348 ~ 89621755 (-) |
| G558124 | NA | other | upstream | 1412108 | 89720475 ~ 89722021 (-) |
| G558246 | LOC106562569 | other | upstream | 1557601 | 89865968 ~ 89868057 (-) |
| G558339 | LOC106587697 | other | upstream | 1665815 | 89974182 ~ 89981624 (-) |
