G557212


Basic Information

Item Value
gene id G557212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 88502842 ~ 88503539 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU631535
tccttttgtctctctgtctctctctcctttctgttcatACTCAAtcgttttgtctctctctgtctctctctcctttctgttcatACTCAATcgttttgtctctctgtctctctctcctttctgttcatACTCAATcgttttgtctgtctctctgtctctgtctctctgtctctgtctctctgtctctctctcctttctgttcatACTCAatccttttgtctctctctgtctctctctcctttctgttcatACTCAatccttttgtctctctctctctcctttctgttcatACTCAAtcgttttgtctctctctctctgtcgctctctcctttctgttcatACTCAAtcgttttgtctctctctgtctctctctcctttctgttcatACTCAATcgttttgtctctctgtctctctctcctttctgttcatACTCAATcgttttgtctctgtctctctctcctttctgttcatACTCAAtcgttttgtctctctctctctctctcctttctgttcatACTCAATcgttttgtctctctgtctctctctcctttctgttcatACTCAATcgttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU631535 True 574 lncRNA 0.42 2 88502842 88503539

Neighbor

gene id symbol gene type direction distance location
LOC110513137 LOC106562701 coding downstream 505954 87991498 ~ 87996888 (-)
LOC110526751 LOC106562707 coding downstream 642417 87773201 ~ 87860425 (-)
LOC110526757 LOC106562769 coding downstream 783084 87711280 ~ 87719758 (-)
LOC110526758 call4 coding downstream 792078 87702276 ~ 87710764 (-)
LOC110513865 LOC106562791 coding downstream 809770 87546236 ~ 87693072 (-)
uacab LOC106587861 coding upstream 194974 88698513 ~ 88784021 (-)
LOC110527001 mo4l1 coding upstream 298139 88801678 ~ 88815746 (-)
LOC110526783 LOC106562667 coding upstream 313532 88817071 ~ 88819232 (-)
LOC118936482 LOC105013624 coding upstream 325158 88828697 ~ 88951131 (-)
LOC110506978 LOC106587757 coding upstream 453051 88956590 ~ 88964509 (-)
G557207 NA non-coding downstream 25092 88477031 ~ 88477750 (-)
G557146 NA non-coding downstream 58087 88443873 ~ 88444755 (-)
G557100 NA non-coding downstream 86606 88345097 ~ 88416236 (-)
G557115 NA non-coding downstream 88741 88397120 ~ 88414101 (-)
G557106 NA non-coding downstream 136333 88366016 ~ 88366509 (-)
G557217 NA non-coding upstream 36037 88539576 ~ 88540069 (-)
G557219 NA non-coding upstream 39804 88543343 ~ 88543564 (-)
G557221 NA non-coding upstream 41757 88545296 ~ 88545523 (-)
G557223 NA non-coding upstream 47825 88551364 ~ 88551711 (-)
G557226 NA non-coding upstream 53742 88557281 ~ 88557607 (-)
LOC110506946 LOC106562772 other downstream 1004750 87456447 ~ 87498104 (-)
G555617 NA other downstream 2044877 86455124 ~ 86457965 (-)
LOC110526741 NA other downstream 2055288 86439615 ~ 86447991 (-)
G557663 NA other upstream 655685 89159224 ~ 89159885 (-)
G558051 NA other upstream 1117809 89621348 ~ 89621755 (-)
G558124 NA other upstream 1216936 89720475 ~ 89722021 (-)
G558246 LOC106562569 other upstream 1362429 89865968 ~ 89868057 (-)
G558339 LOC106587697 other upstream 1470643 89974182 ~ 89981624 (-)

Expression


Co-expression Network