Gene
RNA
| Item | Value |
|---|---|
| gene id | G557217 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 88539576 ~ 88540069 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU631540 | True | 494 | lncRNA | 0.47 | 1 | 88539576 | 88540069 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517398 | tle3 | coding | downstream | 8301 | 88485457 ~ 88531275 (-) |
| LOC110513137 | LOC106562701 | coding | downstream | 542688 | 87991498 ~ 87996888 (-) |
| LOC110526751 | LOC106562707 | coding | downstream | 679151 | 87773201 ~ 87860425 (-) |
| LOC110526757 | LOC106562769 | coding | downstream | 819818 | 87711280 ~ 87719758 (-) |
| LOC110526758 | call4 | coding | downstream | 828812 | 87702276 ~ 87710764 (-) |
| uacab | LOC106587861 | coding | upstream | 158444 | 88698513 ~ 88784021 (-) |
| LOC110527001 | mo4l1 | coding | upstream | 261609 | 88801678 ~ 88815746 (-) |
| LOC110526783 | LOC106562667 | coding | upstream | 277002 | 88817071 ~ 88819232 (-) |
| LOC118936482 | LOC105013624 | coding | upstream | 288628 | 88828697 ~ 88951131 (-) |
| LOC110506978 | LOC106587757 | coding | upstream | 416521 | 88956590 ~ 88964509 (-) |
| G557212 | NA | non-coding | downstream | 36037 | 88502842 ~ 88503539 (-) |
| G557207 | NA | non-coding | downstream | 61826 | 88477031 ~ 88477750 (-) |
| G557146 | NA | non-coding | downstream | 94821 | 88443873 ~ 88444755 (-) |
| G557100 | NA | non-coding | downstream | 123340 | 88345097 ~ 88416236 (-) |
| G557219 | NA | non-coding | upstream | 3274 | 88543343 ~ 88543564 (-) |
| G557221 | NA | non-coding | upstream | 5227 | 88545296 ~ 88545523 (-) |
| G557223 | NA | non-coding | upstream | 11295 | 88551364 ~ 88551711 (-) |
| G557226 | NA | non-coding | upstream | 17212 | 88557281 ~ 88557607 (-) |
| G557227 | NA | non-coding | upstream | 17568 | 88557637 ~ 88557874 (-) |
| LOC110513865 | LOC106562791 | other | downstream | 988186 | 87546236 ~ 87693072 (-) |
| LOC110506946 | LOC106562772 | other | downstream | 1041484 | 87456447 ~ 87498104 (-) |
| G555617 | NA | other | downstream | 2081611 | 86455124 ~ 86457965 (-) |
| LOC110526741 | NA | other | downstream | 2092022 | 86439615 ~ 86447991 (-) |
| G557663 | NA | other | upstream | 619155 | 89159224 ~ 89159885 (-) |
| G558051 | NA | other | upstream | 1081279 | 89621348 ~ 89621755 (-) |
| G558124 | NA | other | upstream | 1180406 | 89720475 ~ 89722021 (-) |
| G558246 | LOC106562569 | other | upstream | 1325899 | 89865968 ~ 89868057 (-) |
| G558339 | LOC106587697 | other | upstream | 1434113 | 89974182 ~ 89981624 (-) |
