G557591


Basic Information

Item Value
gene id G557591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 88970484 ~ 88971015 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU631961
cccagatcagcactcctactctgagacgcttgacaCATACGGACCCAGATTGTTTTTAAAGCTATCTGGTATGCAGAGACTCTGTTCGACGCTGTAGTGACAACCTTTCAGACAGTTGTCTCAGACTTTGCCGTAATGTGATTTAAGTGGCCTTCTGAGAACACACAGTCTGAGTTATGCCAGTTGAAATGGTTTAATGTGTTGTTGTGCAGTGTGATATGTAAATCACCATTCATTCATTTGATCAGGGGAAGAAAGTGCAATATTGTAACCGCATCAGCAATAACAAAAATCTTAAATGTCCTTGTATTTCTACGACCAATAATGTATTCTCTCTTCACTGAAAGATTGCCCATTGTTGTTGCAATAACCATGAGCGTTTTAAAATATAACCTGTACACAGTCACCCATGACCATGAAAAGTATTCTATGTCAAAACTAGCTGTAGCAAATTGGATGCCTTTTGAATTGGTTCGTGAACTGGATTAATTGATGAATGAGACATGGATTAAAGTGGTTAAATTTTGATAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU631961 True 532 lncRNA 0.38 1 88970484 88971015

Neighbor

gene id symbol gene type direction distance location
LOC110506978 LOC106587757 coding downstream 5975 88956590 ~ 88964509 (-)
LOC118936482 LOC105013624 coding downstream 19353 88828697 ~ 88951131 (-)
LOC110526783 LOC106562667 coding downstream 151252 88817071 ~ 88819232 (-)
LOC110527001 mo4l1 coding downstream 154738 88801678 ~ 88815746 (-)
uacab LOC106587861 coding downstream 186463 88698513 ~ 88784021 (-)
LOC110526789 map2k5 coding upstream 3556 88974571 ~ 89111595 (-)
LOC110526791 LOC104927744 coding upstream 256526 89227541 ~ 89267492 (-)
LOC110509922 LOC106563534 coding upstream 346110 89317125 ~ 89346431 (-)
trnag-ucc NA coding upstream 423888 89394903 ~ 89394974 (-)
LOC118964962 chst1 coding upstream 585364 89556379 ~ 89561289 (-)
G557543 NA non-coding downstream 13939 88955361 ~ 88956545 (-)
G557523 NA non-coding downstream 26885 88943341 ~ 88943599 (-)
G557518 NA non-coding downstream 33363 88924912 ~ 88937121 (-)
G557495 NA non-coding downstream 89287 88879891 ~ 88881197 (-)
G557488 NA non-coding downstream 98878 88871337 ~ 88871606 (-)
G557592 NA non-coding upstream 1860 88972875 ~ 88973694 (-)
G557598 NA non-coding upstream 14095 88985110 ~ 88985353 (-)
G557600 NA non-coding upstream 28308 88999323 ~ 88999534 (-)
G557601 NA non-coding upstream 46817 89017832 ~ 89018153 (-)
G557604 NA non-coding upstream 56470 89027485 ~ 89027714 (-)
LOC110526751 LOC106562707 other downstream 1185132 87773201 ~ 87860425 (-)
LOC110513865 LOC106562791 other downstream 1419094 87546236 ~ 87693072 (-)
LOC110506946 LOC106562772 other downstream 1472392 87456447 ~ 87498104 (-)
G555617 NA other downstream 2512519 86455124 ~ 86457965 (-)
LOC110526741 NA other downstream 2522930 86439615 ~ 86447991 (-)
G557663 NA other upstream 188209 89159224 ~ 89159885 (-)
G558051 NA other upstream 650333 89621348 ~ 89621755 (-)
G558124 NA other upstream 749460 89720475 ~ 89722021 (-)
G558246 LOC106562569 other upstream 894953 89865968 ~ 89868057 (-)
G558339 LOC106587697 other upstream 1003167 89974182 ~ 89981624 (-)

Expression


Co-expression Network