G557598



Basic Information


Item Value
gene id G557598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 88985110 ~ 88985353 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU631968
gtcaaaggcttttttgaaatcaacaaagcatgagaagactttgcctttgttttggtttgtttggttgtcaattagggtgtgcagggtgaatacatggtctgttgtatggtaatttggtaaaaagacaatttgacatttgctcagtgcattgttttcattgaggaaatgtacgagtctgctgttaatgataatgcagaggattttcccaaggttactgttgacgcatatcccacggtagttattg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU631968 True 244 lncRNA 0.38 1 88985110 88985353

Neighbor


gene id symbol gene type direction distance location
LOC110506978 LOC106587757 coding downstream 20601 88956590 ~ 88964509 (-)
LOC118936482 LOC105013624 coding downstream 33979 88828697 ~ 88951131 (-)
LOC110526783 LOC106562667 coding downstream 165878 88817071 ~ 88819232 (-)
LOC110527001 mo4l1 coding downstream 169364 88801678 ~ 88815746 (-)
uacab LOC106587861 coding downstream 201089 88698513 ~ 88784021 (-)
LOC110526791 LOC104927744 coding upstream 242188 89227541 ~ 89267492 (-)
LOC110509922 LOC106563534 coding upstream 331772 89317125 ~ 89346431 (-)
trnag-ucc NA coding upstream 409550 89394903 ~ 89394974 (-)
LOC118964962 chst1 coding upstream 571026 89556379 ~ 89561289 (-)
LOC110526793 LOC106587778 coding upstream 972562 89956035 ~ 89965389 (-)
G557592 NA non-coding downstream 11416 88972875 ~ 88973694 (-)
G557591 NA non-coding downstream 14095 88970484 ~ 88971015 (-)
G557543 NA non-coding downstream 28565 88955361 ~ 88956545 (-)
G557523 NA non-coding downstream 41511 88943341 ~ 88943599 (-)
G557518 NA non-coding downstream 47989 88924912 ~ 88937121 (-)
G557600 NA non-coding upstream 13970 88999323 ~ 88999534 (-)
G557601 NA non-coding upstream 32479 89017832 ~ 89018153 (-)
G557604 NA non-coding upstream 42132 89027485 ~ 89027714 (-)
G557605 NA non-coding upstream 48570 89033923 ~ 89034195 (-)
G557606 NA non-coding upstream 53396 89038749 ~ 89039465 (-)
LOC110526751 LOC106562707 other downstream 1199758 87773201 ~ 87860425 (-)
LOC110513865 LOC106562791 other downstream 1433720 87546236 ~ 87693072 (-)
LOC110506946 LOC106562772 other downstream 1487018 87456447 ~ 87498104 (-)
G555617 NA other downstream 2527145 86455124 ~ 86457965 (-)
LOC110526741 NA other downstream 2537556 86439615 ~ 86447991 (-)
G557663 NA other upstream 173871 89159224 ~ 89159885 (-)
G558051 NA other upstream 635995 89621348 ~ 89621755 (-)
G558124 NA other upstream 735122 89720475 ~ 89722021 (-)
G558246 LOC106562569 other upstream 880615 89865968 ~ 89868057 (-)
G558339 LOC106587697 other upstream 988829 89974182 ~ 89981624 (-)

Expression



Co-expression Network