G558124


Basic Information

Item Value
gene id G558124
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 89720475 ~ 89722021 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU632626
TACTACAACTCTTCCCCGGGTCCTTGGTGTTTTCTGTCAACATACTGCAATCCTTTCCTGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTCCCTGGGTCCTTGGTGTACCagagatgtgttttctgtcaACATACTACAACTCTTCCCTGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTCCCTGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTCCCTGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTTACCGGGTCCTTGGTATTTTCTGTCAACATACTGCAACTCTTCCCCGGGTCCTTGGTGTTTTCTGTCAACATACTGCAACTCTTCCCTGGGTCCTTGGTGTTTTCTGTCAACATACTGCAACTCTTCCCCGGGTCCTTGGTGTTTTCTGTCAACATACTGCAACTCTTCCCTGGGTCCTTGGTGTACaagagatgtgttttctgtcaacatactacaactcttccctgggtccttggtgctttctgtcaacatactacaactc
>TU632627
TACTACAACTCTTCCCTGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTCCCCGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTCCCTGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTCCCTGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTTCCTGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTCCCCGGGTCCTTGGTGTTTTCTGTCAACATACTACAACTCTTCCCTGGAGACTTGGTGTTTTCTGTCAACATACTGCAACTCTTCCCTGGGTCCTTGGTGTACaagagatgtgttttctgtcaacatactacaactcttccctgggtccttggtgttttctgtcaacatactacaactcttcccTGGGTCCTTGGTGTACaagagatgtgttttctgtcaacatactacaactcttccctgggtccttggtgctttctgtcaacatactacaactc

Function

NR:

description
SUMO-specific isopeptidase USPL1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU632626 False 541 TUCP 0.46 2 89720475 89721154
TU632627 True 499 lncRNA 0.45 2 89720475 89722021

Neighbor

gene id symbol gene type direction distance location
LOC118964962 chst1 coding downstream 159186 89556379 ~ 89561289 (-)
trnag-ucc NA coding downstream 325501 89394903 ~ 89394974 (-)
LOC110509922 LOC106563534 coding downstream 374044 89317125 ~ 89346431 (-)
LOC110526791 LOC104927744 coding downstream 452983 89227541 ~ 89267492 (-)
LOC110526789 map2k5 coding downstream 608880 88974571 ~ 89111595 (-)
LOC110526793 LOC106587778 coding upstream 235894 89956035 ~ 89965389 (-)
LOC110506981 dh12b coding upstream 535223 90257244 ~ 90267943 (-)
LOC118965054 NA coding upstream 579365 90301386 ~ 90303985 (-)
LOC110506215 ttc17 coding upstream 581097 90303118 ~ 90324307 (-)
trpm5 trpm5 coding upstream 638408 90360429 ~ 90403385 (-)
G558087 NA non-coding downstream 79013 89641123 ~ 89641462 (-)
G558059 NA non-coding downstream 87468 89632791 ~ 89633007 (-)
G558055 NA non-coding downstream 89567 89628051 ~ 89630908 (-)
G558054 NA non-coding downstream 94187 89623976 ~ 89626288 (-)
G558037 NA non-coding downstream 110197 89610005 ~ 89610278 (-)
G558135 NA non-coding upstream 17678 89739699 ~ 89739901 (-)
G558148 NA non-coding upstream 32225 89754246 ~ 89754551 (-)
G558156 NA non-coding upstream 36714 89758735 ~ 89758963 (-)
G558165 NA non-coding upstream 46374 89768395 ~ 89768777 (-)
G558166 NA non-coding upstream 46951 89768972 ~ 89769391 (-)
G558051 NA other downstream 98720 89621348 ~ 89621755 (-)
G557663 NA other downstream 560590 89159224 ~ 89159885 (-)
LOC110526751 LOC106562707 other downstream 1935123 87773201 ~ 87860425 (-)
LOC110513865 LOC106562791 other downstream 2169085 87546236 ~ 87693072 (-)
LOC110506946 LOC106562772 other downstream 2222383 87456447 ~ 87498104 (-)
G558246 LOC106562569 other upstream 143947 89865968 ~ 89868057 (-)
G558339 LOC106587697 other upstream 252161 89974182 ~ 89981624 (-)
G559123 NA other upstream 1201077 90923098 ~ 90923835 (-)
G559162 NA other upstream 1268809 90990830 ~ 90992177 (-)
G559163 NA other upstream 1270415 90992436 ~ 90992949 (-)

Expression


Co-expression Network