Gene
RNA
| Item | Value |
|---|---|
| gene id | G558148 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 89754246 ~ 89754551 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU632652 | True | 306 | lncRNA | 0.57 | 1 | 89754246 | 89754551 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964962 | chst1 | coding | downstream | 192957 | 89556379 ~ 89561289 (-) |
| trnag-ucc | NA | coding | downstream | 359272 | 89394903 ~ 89394974 (-) |
| LOC110509922 | LOC106563534 | coding | downstream | 407815 | 89317125 ~ 89346431 (-) |
| LOC110526791 | LOC104927744 | coding | downstream | 486754 | 89227541 ~ 89267492 (-) |
| LOC110526789 | map2k5 | coding | downstream | 642651 | 88974571 ~ 89111595 (-) |
| LOC110526793 | LOC106587778 | coding | upstream | 203364 | 89956035 ~ 89965389 (-) |
| LOC110506981 | dh12b | coding | upstream | 502693 | 90257244 ~ 90267943 (-) |
| LOC118965054 | NA | coding | upstream | 546835 | 90301386 ~ 90303985 (-) |
| LOC110506215 | ttc17 | coding | upstream | 548567 | 90303118 ~ 90324307 (-) |
| trpm5 | trpm5 | coding | upstream | 605878 | 90360429 ~ 90403385 (-) |
| G558135 | NA | non-coding | downstream | 14345 | 89739699 ~ 89739901 (-) |
| G558124 | NA | non-coding | downstream | 32225 | 89720475 ~ 89722021 (-) |
| G558087 | NA | non-coding | downstream | 112784 | 89641123 ~ 89641462 (-) |
| G558059 | NA | non-coding | downstream | 121239 | 89632791 ~ 89633007 (-) |
| G558055 | NA | non-coding | downstream | 123338 | 89628051 ~ 89630908 (-) |
| G558156 | NA | non-coding | upstream | 4184 | 89758735 ~ 89758963 (-) |
| G558165 | NA | non-coding | upstream | 13844 | 89768395 ~ 89768777 (-) |
| G558166 | NA | non-coding | upstream | 14421 | 89768972 ~ 89769391 (-) |
| G558168 | NA | non-coding | upstream | 14878 | 89769429 ~ 89769743 (-) |
| G558174 | NA | non-coding | upstream | 19444 | 89773995 ~ 89774208 (-) |
| G558051 | NA | other | downstream | 132491 | 89621348 ~ 89621755 (-) |
| G557663 | NA | other | downstream | 594361 | 89159224 ~ 89159885 (-) |
| LOC110526751 | LOC106562707 | other | downstream | 1968894 | 87773201 ~ 87860425 (-) |
| LOC110513865 | LOC106562791 | other | downstream | 2202856 | 87546236 ~ 87693072 (-) |
| G558246 | LOC106562569 | other | upstream | 111417 | 89865968 ~ 89868057 (-) |
| G558339 | LOC106587697 | other | upstream | 219631 | 89974182 ~ 89981624 (-) |
| G559123 | NA | other | upstream | 1168547 | 90923098 ~ 90923835 (-) |
| G559162 | NA | other | upstream | 1236279 | 90990830 ~ 90992177 (-) |
| G559163 | NA | other | upstream | 1237885 | 90992436 ~ 90992949 (-) |
