Gene
RNA
| Item | Value |
|---|---|
| gene id | G558471 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 90123089 ~ 90123483 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tight junction protein ZO-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU633095 | True | 395 | lncRNA | 0.45 | 1 | 90123089 | 90123483 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526793 | LOC106587778 | coding | downstream | 157700 | 89956035 ~ 89965389 (-) |
| LOC118964962 | chst1 | coding | downstream | 561800 | 89556379 ~ 89561289 (-) |
| trnag-ucc | NA | coding | downstream | 728115 | 89394903 ~ 89394974 (-) |
| LOC110509922 | LOC106563534 | coding | downstream | 776658 | 89317125 ~ 89346431 (-) |
| LOC110526791 | LOC104927744 | coding | downstream | 855597 | 89227541 ~ 89267492 (-) |
| LOC110506981 | dh12b | coding | upstream | 133761 | 90257244 ~ 90267943 (-) |
| LOC118965054 | NA | coding | upstream | 177903 | 90301386 ~ 90303985 (-) |
| LOC110506215 | ttc17 | coding | upstream | 179635 | 90303118 ~ 90324307 (-) |
| trpm5 | trpm5 | coding | upstream | 236946 | 90360429 ~ 90403385 (-) |
| LOC118936665 | kcnq1 | coding | upstream | 322401 | 90445884 ~ 90495091 (-) |
| G558430 | NA | non-coding | downstream | 75798 | 90042676 ~ 90047291 (-) |
| G558371 | NA | non-coding | downstream | 107727 | 90015091 ~ 90015362 (-) |
| G558369 | NA | non-coding | downstream | 111033 | 90011772 ~ 90012056 (-) |
| G558364 | NA | non-coding | downstream | 119721 | 90003059 ~ 90003368 (-) |
| G558360 | NA | non-coding | downstream | 129479 | 89992928 ~ 89993610 (-) |
| G558472 | NA | non-coding | upstream | 331 | 90123814 ~ 90124032 (-) |
| G558473 | NA | non-coding | upstream | 1044 | 90124527 ~ 90124991 (-) |
| G558488 | NA | non-coding | upstream | 17864 | 90141347 ~ 90141569 (-) |
| G558505 | NA | non-coding | upstream | 39232 | 90162715 ~ 90163180 (-) |
| G558513 | NA | non-coding | upstream | 62323 | 90185806 ~ 90186037 (-) |
| G558339 | LOC106587697 | other | downstream | 141465 | 89974182 ~ 89981624 (-) |
| G558246 | LOC106562569 | other | downstream | 255032 | 89865968 ~ 89868057 (-) |
| G558124 | NA | other | downstream | 401935 | 89720475 ~ 89722021 (-) |
| G558051 | NA | other | downstream | 501334 | 89621348 ~ 89621755 (-) |
| G557663 | NA | other | downstream | 963204 | 89159224 ~ 89159885 (-) |
| G559123 | NA | other | upstream | 799615 | 90923098 ~ 90923835 (-) |
| G559162 | NA | other | upstream | 867347 | 90990830 ~ 90992177 (-) |
| G559163 | NA | other | upstream | 868953 | 90992436 ~ 90992949 (-) |
| LOC110511526 | LOC106592072 | other | upstream | 1133022 | 91248205 ~ 91286961 (-) |
| G559364 | NA | other | upstream | 1165609 | 91289092 ~ 91290337 (-) |
