Gene
RNA
| Item | Value |
|---|---|
| gene id | G558530 |
| gene name | LOC106581475 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 90239736 ~ 90239951 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109523355 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU633162 | True | 216 | lncRNA | 0.59 | 1 | 90239736 | 90239951 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526793 | LOC106587778 | coding | downstream | 274347 | 89956035 ~ 89965389 (-) |
| LOC118964962 | chst1 | coding | downstream | 678447 | 89556379 ~ 89561289 (-) |
| trnag-ucc | NA | coding | downstream | 844762 | 89394903 ~ 89394974 (-) |
| LOC110509922 | LOC106563534 | coding | downstream | 893305 | 89317125 ~ 89346431 (-) |
| LOC110526791 | LOC104927744 | coding | downstream | 972244 | 89227541 ~ 89267492 (-) |
| LOC110506981 | dh12b | coding | upstream | 17293 | 90257244 ~ 90267943 (-) |
| LOC118965054 | NA | coding | upstream | 61435 | 90301386 ~ 90303985 (-) |
| LOC110506215 | ttc17 | coding | upstream | 63167 | 90303118 ~ 90324307 (-) |
| trpm5 | trpm5 | coding | upstream | 120478 | 90360429 ~ 90403385 (-) |
| LOC118936665 | kcnq1 | coding | upstream | 205933 | 90445884 ~ 90495091 (-) |
| G558520 | NA | non-coding | downstream | 7216 | 90232292 ~ 90232520 (-) |
| G558514 | NA | non-coding | downstream | 9293 | 90188111 ~ 90230443 (-) |
| G558513 | NA | non-coding | downstream | 53699 | 90185806 ~ 90186037 (-) |
| G558505 | NA | non-coding | downstream | 76556 | 90162715 ~ 90163180 (-) |
| G558488 | NA | non-coding | downstream | 98167 | 90141347 ~ 90141569 (-) |
| G558720 | NA | non-coding | upstream | 2726 | 90242677 ~ 90242876 (-) |
| G558721 | NA | non-coding | upstream | 4378 | 90244329 ~ 90244639 (-) |
| G558723 | NA | non-coding | upstream | 9174 | 90249125 ~ 90250699 (-) |
| G558724 | NA | non-coding | upstream | 12099 | 90252050 ~ 90253670 (-) |
| G558725 | NA | non-coding | upstream | 14195 | 90254146 ~ 90255496 (-) |
| G558339 | LOC106587697 | other | downstream | 258112 | 89974182 ~ 89981624 (-) |
| G558246 | LOC106562569 | other | downstream | 371679 | 89865968 ~ 89868057 (-) |
| G558124 | NA | other | downstream | 518582 | 89720475 ~ 89722021 (-) |
| G558051 | NA | other | downstream | 617981 | 89621348 ~ 89621755 (-) |
| G557663 | NA | other | downstream | 1079851 | 89159224 ~ 89159885 (-) |
| G559123 | NA | other | upstream | 683147 | 90923098 ~ 90923835 (-) |
| G559162 | NA | other | upstream | 750879 | 90990830 ~ 90992177 (-) |
| G559163 | NA | other | upstream | 752485 | 90992436 ~ 90992949 (-) |
| LOC110511526 | LOC106592072 | other | upstream | 1016554 | 91248205 ~ 91286961 (-) |
| G559364 | NA | other | upstream | 1049141 | 91289092 ~ 91290337 (-) |
