Gene
RNA
| Item | Value |
|---|---|
| gene id | G559020 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 90898701 ~ 90899194 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: extracellular matrix protein FRAS1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU633859 | True | 410 | lncRNA | 0.45 | 2 | 90898701 | 90899194 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506998 | LOC106562604 | coding | upstream | 83008 | 90798020 ~ 90815693 (+) |
| LOC110506219 | LOC106562554 | coding | upstream | 117888 | 90759492 ~ 90780813 (+) |
| LOC110527007 | pex16 | coding | upstream | 171679 | 90714625 ~ 90727022 (+) |
| LOC110526798 | cars | coding | upstream | 200172 | 90675515 ~ 90698529 (+) |
| LOC110506992 | LOC106562470 | coding | upstream | 456035 | 90441506 ~ 90442666 (+) |
| LOC118964967 | NA | coding | downstream | 2839 | 90902033 ~ 90903249 (+) |
| LOC118964968 | tmod3 | coding | downstream | 81530 | 90980724 ~ 91023428 (+) |
| LOC110518689 | leo1 | coding | downstream | 143340 | 91042534 ~ 91063779 (+) |
| LOC110526812 | LOC106587736 | coding | downstream | 270975 | 91170169 ~ 91196357 (+) |
| LOC110526813 | LOC106587896 | coding | downstream | 340740 | 91239934 ~ 91242169 (+) |
| G559013 | NA | non-coding | upstream | 15373 | 90881452 ~ 90883328 (+) |
| G559011 | NA | non-coding | upstream | 25645 | 90872729 ~ 90873056 (+) |
| G559010 | NA | non-coding | upstream | 27492 | 90870692 ~ 90871209 (+) |
| G558986 | NA | non-coding | upstream | 112528 | 90785876 ~ 90786173 (+) |
| G558925 | NA | non-coding | upstream | 124178 | 90770738 ~ 90774523 (+) |
| G559022 | NA | non-coding | downstream | 11770 | 90910964 ~ 90911396 (+) |
| G559023 | NA | non-coding | downstream | 20563 | 90919757 ~ 90960113 (+) |
| G559025 | NA | non-coding | downstream | 29093 | 90928287 ~ 90928814 (+) |
| LOC110526809 | LOC106562822 | non-coding | downstream | 30768 | 90838122 ~ 90932867 (+) |
| G559030 | NA | non-coding | downstream | 39802 | 90938996 ~ 90940720 (+) |
| G558624 | LOC106562471 | other | upstream | 450845 | 90446102 ~ 90447856 (+) |
| LOC118964965 | LOC106562863 | other | upstream | 473869 | 90417861 ~ 90424832 (+) |
| LOC118964964 | LOC106562578 | other | upstream | 572441 | 90324347 ~ 90329324 (+) |
| G559027 | NA | other | downstream | 37723 | 90936917 ~ 90938074 (+) |
| G559047 | NA | other | downstream | 91592 | 90990786 ~ 90992088 (+) |
| LOC110511547 | pde8a | other | downstream | 591323 | 91490509 ~ 91699286 (+) |
| LOC110517107 | LOC106587912 | other | downstream | 876583 | 91764066 ~ 91789867 (+) |
