G559023


Basic Information

Item Value
gene id G559023
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 90919757 ~ 90960113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU633862
GTTAACGGTAGAGGGACTGGTTCCCTCTCGTTAACGGTAGAGGGACTGGTTCCCTCTCGTTAACGGTAGAGGGACTGGTTCCCTCTCGTTAACGGTAGAGGGACTGGTTCCCTCTCGTTAACGGTGGAGGGACTGGTGTTTTCTGCTTCCATCCAATAGATATGAATCTACTCGAACAACCATAGATCTTGCTGTACTAGAGAGGTCAATCTTGCTCAGATAGGTCTGGTTGATGGCTCCAGCCATGCTGCTGTTTATGCTTGTGTGTTCTATATGTCCGTTGTAGATCTGACCCCAGCACTGTAACAGCCCTGTGTTGCTCTATGTTCACCCTGCCGTGCAGCacactgccactctctctctcacacagccccCGCTCCATGCTGtcccttttttatttatttattttacctttatttaactaggcaagtcagttaagaacaaattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU633862 True 448 lncRNA 0.48 2 90919757 90960113

Neighbor

gene id symbol gene type direction distance location
LOC118964967 NA coding upstream 16508 90902033 ~ 90903249 (+)
LOC110506998 LOC106562604 coding upstream 104064 90798020 ~ 90815693 (+)
LOC110506219 LOC106562554 coding upstream 138944 90759492 ~ 90780813 (+)
LOC110527007 pex16 coding upstream 192735 90714625 ~ 90727022 (+)
LOC110526798 cars coding upstream 221228 90675515 ~ 90698529 (+)
LOC118964968 tmod3 coding downstream 20611 90980724 ~ 91023428 (+)
LOC110518689 leo1 coding downstream 82421 91042534 ~ 91063779 (+)
LOC110526812 LOC106587736 coding downstream 210056 91170169 ~ 91196357 (+)
LOC110526813 LOC106587896 coding downstream 279821 91239934 ~ 91242169 (+)
LOC110514654 LOC106587893 coding downstream 333546 91293659 ~ 91343222 (+)
G559022 NA non-coding upstream 8361 90910964 ~ 90911396 (+)
G559020 NA non-coding upstream 20563 90898701 ~ 90899194 (+)
G559013 NA non-coding upstream 36429 90881452 ~ 90883328 (+)
G559011 NA non-coding upstream 46701 90872729 ~ 90873056 (+)
G559010 NA non-coding upstream 48548 90870692 ~ 90871209 (+)
G559037 NA non-coding downstream 2894 90963007 ~ 90967848 (+)
G559044 NA non-coding downstream 24834 90984947 ~ 90985638 (+)
G559045 NA non-coding downstream 26623 90986736 ~ 90987039 (+)
G559047 NA non-coding downstream 30971 90990786 ~ 90992088 (+)
G559057 NA non-coding downstream 52366 91012479 ~ 91012898 (+)
LOC110526809 LOC106562822 other upstream 35103 90838122 ~ 90932867 (+)
G558624 LOC106562471 other upstream 471901 90446102 ~ 90447856 (+)
LOC118964965 LOC106562863 other upstream 494925 90417861 ~ 90424832 (+)
LOC118964964 LOC106562578 other upstream 593497 90324347 ~ 90329324 (+)
LOC110511547 pde8a other downstream 530404 91490509 ~ 91699286 (+)
LOC110517107 LOC106587912 other downstream 815664 91764066 ~ 91789867 (+)
LOC118964972 NA other downstream 1010054 91970091 ~ 91973388 (+)

Expression


Co-expression Network