Gene
RNA
| Item | Value |
|---|---|
| gene id | G560069 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 92396119 ~ 92396955 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: keratin-associated protein 16-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU635375 | True | 311 | lncRNA | 0.40 | 2 | 92396119 | 92396955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964976 | NA | coding | upstream | 298494 | 92092621 ~ 92097625 (+) |
| LOC118965057 | LOC106596248 | coding | upstream | 327891 | 92067440 ~ 92068228 (+) |
| LOC110526817 | tipin | coding | upstream | 329554 | 92048098 ~ 92066565 (+) |
| lctla | LOC105026505 | coding | upstream | 351304 | 92031197 ~ 92044815 (+) |
| LOC118964972 | NA | coding | upstream | 422731 | 91970091 ~ 91973388 (+) |
| LOC118964978 | NA | coding | downstream | 28115 | 92370253 ~ 92431717 (+) |
| trnaq-cug-2 | NA | coding | downstream | 41120 | 92438075 ~ 92438146 (+) |
| LOC110487142 | LOC106587922 | coding | downstream | 43194 | 92440149 ~ 92597197 (+) |
| LOC118965058 | NA | coding | downstream | 47264 | 92444219 ~ 92462980 (+) |
| LOC110527020 | LOC106587930 | coding | downstream | 363053 | 92760008 ~ 92767862 (+) |
| G560058 | NA | non-coding | upstream | 43374 | 92349562 ~ 92352745 (+) |
| G560045 | NA | non-coding | upstream | 84097 | 92309773 ~ 92312022 (+) |
| G560036 | NA | non-coding | upstream | 95604 | 92299880 ~ 92300515 (+) |
| G560032 | NA | non-coding | upstream | 108622 | 92286925 ~ 92287497 (+) |
| G560018 | NA | non-coding | upstream | 150397 | 92245254 ~ 92245722 (+) |
| G560042 | NA | non-coding | downstream | 19282 | 92416237 ~ 92417238 (+) |
| G560233 | NA | non-coding | downstream | 44779 | 92441734 ~ 92443222 (+) |
| G560237 | NA | non-coding | downstream | 51583 | 92448538 ~ 92449045 (+) |
| G560241 | NA | non-coding | downstream | 81888 | 92478843 ~ 92479489 (+) |
| G560246 | NA | non-coding | downstream | 94907 | 92491862 ~ 92492932 (+) |
| G560039 | NA | other | upstream | 91482 | 92303528 ~ 92304637 (+) |
| LOC110517107 | LOC106587912 | other | upstream | 615502 | 91764066 ~ 91789867 (+) |
| LOC110511547 | pde8a | other | upstream | 787024 | 91490509 ~ 91699286 (+) |
| G560229 | LOC106562795 | other | downstream | 291244 | 92685849 ~ 92690662 (+) |
| G560701 | NA | other | downstream | 815810 | 93212765 ~ 93217580 (+) |
| G560794 | LOC106587968 | other | downstream | 929281 | 93326236 ~ 93328882 (+) |
| LOC110516628 | LOC106587980 | other | downstream | 1139270 | 93536089 ~ 93568621 (+) |
