Gene
RNA
| Item | Value |
|---|---|
| gene id | G563404 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 97532839 ~ 97534369 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106588768 isoform X34 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU640464 | True | 1441 | lncRNA | 0.40 | 2 | 97532839 | 97534369 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516620 | LOC106562854 | coding | upstream | 2935 | 97369711 ~ 97529904 (+) |
| LOC118965002 | NA | coding | upstream | 179979 | 97350492 ~ 97353435 (+) |
| LOC110507008 | LOC106588037 | coding | upstream | 518571 | 96997013 ~ 97014268 (+) |
| LOC110514610 | LOC106591035 | coding | upstream | 1140941 | 96323229 ~ 96392558 (+) |
| LOC118965000 | LOC106593614 | coding | upstream | 1519939 | 95996318 ~ 96012900 (+) |
| LOC110513174 | LOC106588022 | coding | downstream | 2165 | 97536534 ~ 97670291 (+) |
| LOC118936669 | NA | coding | downstream | 145548 | 97679917 ~ 97796621 (+) |
| plekhg4 | LOC106594058 | coding | downstream | 263290 | 97797659 ~ 97943775 (+) |
| LOC118965004 | NA | coding | downstream | 409887 | 97944256 ~ 97947528 (+) |
| LOC118965006 | NA | coding | downstream | 670002 | 98204371 ~ 98206233 (+) |
| G563456 | NA | non-coding | upstream | 22901 | 97508666 ~ 97509938 (+) |
| G563448 | NA | non-coding | upstream | 41671 | 97489970 ~ 97491168 (+) |
| G563445 | NA | non-coding | upstream | 49006 | 97481465 ~ 97483833 (+) |
| G563439 | NA | non-coding | upstream | 68985 | 97463216 ~ 97463854 (+) |
| G563438 | NA | non-coding | upstream | 71096 | 97455861 ~ 97461743 (+) |
| G563467 | NA | non-coding | downstream | 48628 | 97582997 ~ 97583667 (+) |
| G563474 | NA | non-coding | downstream | 63804 | 97598173 ~ 97599064 (+) |
| G563412 | NA | non-coding | downstream | 73266 | 97607635 ~ 97673051 (+) |
| G563477 | NA | non-coding | downstream | 75793 | 97610162 ~ 97611905 (+) |
| G563483 | NA | non-coding | downstream | 88816 | 97623185 ~ 97623624 (+) |
| G562740 | NA | other | upstream | 1045614 | 96481834 ~ 96487225 (+) |
| G562719 | NA | other | upstream | 1144899 | 96384736 ~ 96387940 (+) |
| LOC110510618 | bat1 | other | upstream | 1562331 | 95900120 ~ 95970508 (+) |
| G563588 | NA | other | downstream | 388262 | 97922631 ~ 97923034 (+) |
| G563596 | NA | other | downstream | 415704 | 97950073 ~ 97951916 (+) |
| G564164 | NA | other | downstream | 946211 | 98480580 ~ 98483302 (+) |
| LOC110526849 | vps13c | other | downstream | 1266141 | 98789830 ~ 99009256 (+) |
