Gene
RNA
| Item | Value |
|---|---|
| gene id | G563520 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 97743366 ~ 97743707 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU640674 | True | 301 | lncRNA | 0.49 | 2 | 97743366 | 97743707 |
97,742,000
97,742,400
97,742,800
97,743,200
97,743,600
97,744,000
97,744,400
97,744,400
97,744,800
97,745,200
97,745,600
97,746,000
97,746,400
97,746,800
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513174 | LOC106588022 | coding | upstream | 73075 | 97536534 ~ 97670291 (+) |
| LOC110516620 | LOC106562854 | coding | upstream | 213462 | 97369711 ~ 97529904 (+) |
| LOC118965002 | NA | coding | upstream | 390506 | 97350492 ~ 97353435 (+) |
| LOC110507008 | LOC106588037 | coding | upstream | 729098 | 96997013 ~ 97014268 (+) |
| LOC110514610 | LOC106591035 | coding | upstream | 1351468 | 96323229 ~ 96392558 (+) |
| plekhg4 | LOC106594058 | coding | downstream | 53952 | 97797659 ~ 97943775 (+) |
| LOC118965004 | NA | coding | downstream | 200549 | 97944256 ~ 97947528 (+) |
| LOC118965006 | NA | coding | downstream | 460664 | 98204371 ~ 98206233 (+) |
| hsd11b2 | LOC100135822 | coding | downstream | 692850 | 98436557 ~ 98488276 (+) |
| LOC118965093 | agrp1 | coding | downstream | 826999 | 98570706 ~ 98575061 (+) |
| G563516 | NA | non-coding | upstream | 18205 | 97723389 ~ 97725161 (+) |
| G563495 | NA | non-coding | upstream | 61280 | 97681571 ~ 97682086 (+) |
| G563412 | NA | non-coding | upstream | 70315 | 97607635 ~ 97673051 (+) |
| G563483 | NA | non-coding | upstream | 119742 | 97623185 ~ 97623624 (+) |
| G563477 | NA | non-coding | upstream | 131461 | 97610162 ~ 97611905 (+) |
| G563527 | NA | non-coding | downstream | 11614 | 97755321 ~ 97755750 (+) |
| G563530 | NA | non-coding | downstream | 17116 | 97760823 ~ 97762703 (+) |
| G563531 | NA | non-coding | downstream | 19256 | 97762963 ~ 97763232 (+) |
| G563538 | NA | non-coding | downstream | 39380 | 97783087 ~ 97783857 (+) |
| G563544 | NA | non-coding | downstream | 56068 | 97799775 ~ 97801279 (+) |
| G562740 | NA | other | upstream | 1256141 | 96481834 ~ 96487225 (+) |
| G562719 | NA | other | upstream | 1355426 | 96384736 ~ 96387940 (+) |
| LOC118965000 | LOC106593614 | other | upstream | 1731118 | 95996318 ~ 96012900 (+) |
| LOC110510618 | bat1 | other | upstream | 1772858 | 95900120 ~ 95970508 (+) |
| G563588 | NA | other | downstream | 178924 | 97922631 ~ 97923034 (+) |
| G563596 | NA | other | downstream | 206366 | 97950073 ~ 97951916 (+) |
| G564164 | NA | other | downstream | 736873 | 98480580 ~ 98483302 (+) |
| LOC110526849 | vps13c | other | downstream | 1056803 | 98789830 ~ 99009256 (+) |
| G564500 | NA | other | downstream | 1324200 | 99067907 ~ 99068597 (+) |
