G563531


Basic Information

Item Value
gene id G563531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 97762963 ~ 97763232 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU640689
GTAATGACCTCACCCTCTGTCTATCTAAACCCTATACGGTAATgacctcaccctctgtctctctataccctATACGGTAATGACCTCACCCTCTGTCTCTATACCCTATACGGTAATgacctcaccctctgtctctctataccctATACGGTAATgacctcaccctctgtctctctataccctATACGGTAATgacctcaccctctgtctctctataccctTTTCATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU640689 True 230 lncRNA 0.46 2 97762963 97763232

Neighbor

gene id symbol gene type direction distance location
LOC110513174 LOC106588022 coding upstream 92672 97536534 ~ 97670291 (+)
LOC110516620 LOC106562854 coding upstream 233059 97369711 ~ 97529904 (+)
LOC118965002 NA coding upstream 410103 97350492 ~ 97353435 (+)
LOC110507008 LOC106588037 coding upstream 748695 96997013 ~ 97014268 (+)
LOC110514610 LOC106591035 coding upstream 1371065 96323229 ~ 96392558 (+)
plekhg4 LOC106594058 coding downstream 34427 97797659 ~ 97943775 (+)
LOC118965004 NA coding downstream 181024 97944256 ~ 97947528 (+)
LOC118965006 NA coding downstream 441139 98204371 ~ 98206233 (+)
hsd11b2 LOC100135822 coding downstream 673325 98436557 ~ 98488276 (+)
LOC118965093 agrp1 coding downstream 807474 98570706 ~ 98575061 (+)
G563530 NA non-coding upstream 260 97760823 ~ 97762703 (+)
G563527 NA non-coding upstream 7213 97755321 ~ 97755750 (+)
G563520 NA non-coding upstream 19256 97743366 ~ 97743707 (+)
G563516 NA non-coding upstream 37802 97723389 ~ 97725161 (+)
G563495 NA non-coding upstream 80877 97681571 ~ 97682086 (+)
G563538 NA non-coding downstream 19855 97783087 ~ 97783857 (+)
G563544 NA non-coding downstream 36543 97799775 ~ 97801279 (+)
G563546 NA non-coding downstream 40527 97803759 ~ 97804829 (+)
G563549 NA non-coding downstream 51974 97815206 ~ 97815620 (+)
G563550 NA non-coding downstream 58353 97821585 ~ 97821831 (+)
G562740 NA other upstream 1275738 96481834 ~ 96487225 (+)
G562719 NA other upstream 1375023 96384736 ~ 96387940 (+)
LOC118965000 LOC106593614 other upstream 1750715 95996318 ~ 96012900 (+)
LOC110510618 bat1 other upstream 1792455 95900120 ~ 95970508 (+)
G563588 NA other downstream 159399 97922631 ~ 97923034 (+)
G563596 NA other downstream 186841 97950073 ~ 97951916 (+)
G564164 NA other downstream 717348 98480580 ~ 98483302 (+)
LOC110526849 vps13c other downstream 1037278 98789830 ~ 99009256 (+)
G564500 NA other downstream 1304675 99067907 ~ 99068597 (+)

Expression


Co-expression Network