Gene
RNA
| Item | Value |
|---|---|
| gene id | G563549 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 97815206 ~ 97815620 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU640712 | True | 302 | lncRNA | 0.39 | 3 | 97815206 | 97815620 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936669 | NA | coding | upstream | 18585 | 97679917 ~ 97796621 (+) |
| LOC110513174 | LOC106588022 | coding | upstream | 144915 | 97536534 ~ 97670291 (+) |
| LOC110516620 | LOC106562854 | coding | upstream | 285302 | 97369711 ~ 97529904 (+) |
| LOC118965002 | NA | coding | upstream | 462346 | 97350492 ~ 97353435 (+) |
| LOC110507008 | LOC106588037 | coding | upstream | 800938 | 96997013 ~ 97014268 (+) |
| LOC118965004 | NA | coding | downstream | 128636 | 97944256 ~ 97947528 (+) |
| LOC118965006 | NA | coding | downstream | 388751 | 98204371 ~ 98206233 (+) |
| hsd11b2 | LOC100135822 | coding | downstream | 620937 | 98436557 ~ 98488276 (+) |
| LOC118965093 | agrp1 | coding | downstream | 755086 | 98570706 ~ 98575061 (+) |
| LOC118965094 | NA | coding | downstream | 783627 | 98599247 ~ 98600304 (+) |
| G563546 | NA | non-coding | upstream | 10377 | 97803759 ~ 97804829 (+) |
| G563544 | NA | non-coding | upstream | 13927 | 97799775 ~ 97801279 (+) |
| G563538 | NA | non-coding | upstream | 31349 | 97783087 ~ 97783857 (+) |
| G563531 | NA | non-coding | upstream | 51974 | 97762963 ~ 97763232 (+) |
| G563530 | NA | non-coding | upstream | 52503 | 97760823 ~ 97762703 (+) |
| G563550 | NA | non-coding | downstream | 5965 | 97821585 ~ 97821831 (+) |
| G563566 | NA | non-coding | downstream | 49998 | 97865618 ~ 97866473 (+) |
| G563570 | NA | non-coding | downstream | 59509 | 97875129 ~ 97876119 (+) |
| G563569 | NA | non-coding | downstream | 59977 | 97875597 ~ 97876194 (+) |
| G563576 | NA | non-coding | downstream | 76983 | 97892603 ~ 97895388 (+) |
| G562740 | NA | other | upstream | 1327981 | 96481834 ~ 96487225 (+) |
| G562719 | NA | other | upstream | 1427266 | 96384736 ~ 96387940 (+) |
| LOC118965000 | LOC106593614 | other | upstream | 1802958 | 95996318 ~ 96012900 (+) |
| G563588 | NA | other | downstream | 107011 | 97922631 ~ 97923034 (+) |
| G563596 | NA | other | downstream | 134453 | 97950073 ~ 97951916 (+) |
| G564164 | NA | other | downstream | 664960 | 98480580 ~ 98483302 (+) |
| LOC110526849 | vps13c | other | downstream | 984890 | 98789830 ~ 99009256 (+) |
| G564500 | NA | other | downstream | 1252287 | 99067907 ~ 99068597 (+) |
