Gene
RNA
| Item | Value |
|---|---|
| gene id | G563613 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 98008723 ~ 98008995 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU640798 | True | 273 | lncRNA | 0.52 | 1 | 98008723 | 98008995 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965004 | NA | coding | upstream | 61195 | 97944256 ~ 97947528 (+) |
| plekhg4 | LOC106594058 | coding | upstream | 64948 | 97797659 ~ 97943775 (+) |
| LOC118936669 | NA | coding | upstream | 212102 | 97679917 ~ 97796621 (+) |
| LOC110513174 | LOC106588022 | coding | upstream | 338432 | 97536534 ~ 97670291 (+) |
| LOC110516620 | LOC106562854 | coding | upstream | 478819 | 97369711 ~ 97529904 (+) |
| LOC118965006 | NA | coding | downstream | 195376 | 98204371 ~ 98206233 (+) |
| hsd11b2 | LOC100135822 | coding | downstream | 427562 | 98436557 ~ 98488276 (+) |
| LOC118965093 | agrp1 | coding | downstream | 561711 | 98570706 ~ 98575061 (+) |
| LOC118965094 | NA | coding | downstream | 590252 | 98599247 ~ 98600304 (+) |
| LOC110516022 | LOC105025469 | coding | downstream | 671425 | 98680420 ~ 98724380 (+) |
| G563612 | NA | non-coding | upstream | 12967 | 97995377 ~ 97995756 (+) |
| G563611 | NA | non-coding | upstream | 33458 | 97972107 ~ 97975265 (+) |
| G563610 | NA | non-coding | upstream | 36732 | 97971416 ~ 97971991 (+) |
| G563596 | NA | non-coding | upstream | 58106 | 97950073 ~ 97951916 (+) |
| G563580 | NA | non-coding | upstream | 101405 | 97906674 ~ 97907318 (+) |
| G563614 | NA | non-coding | downstream | 1409 | 98010404 ~ 98011130 (+) |
| G563623 | NA | non-coding | downstream | 23035 | 98032030 ~ 98104171 (+) |
| G563640 | NA | non-coding | downstream | 80597 | 98089592 ~ 98090637 (+) |
| G563642 | NA | non-coding | downstream | 93260 | 98102255 ~ 98103233 (+) |
| G563643 | NA | non-coding | downstream | 95284 | 98104279 ~ 98105457 (+) |
| G563588 | NA | other | upstream | 85689 | 97922631 ~ 97923034 (+) |
| G562740 | NA | other | upstream | 1521498 | 96481834 ~ 96487225 (+) |
| G564164 | NA | other | downstream | 471585 | 98480580 ~ 98483302 (+) |
| LOC110526849 | vps13c | other | downstream | 791515 | 98789830 ~ 99009256 (+) |
| G564500 | NA | other | downstream | 1058912 | 99067907 ~ 99068597 (+) |
| LOC110498619 | LOC105016647 | other | downstream | 1415897 | 99424686 ~ 99469650 (+) |
| G564667 | NA | other | downstream | 1528025 | 99537020 ~ 99539242 (+) |
