Gene
RNA
| Item | Value |
|---|---|
| gene id | G564409 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 98782664 ~ 98782897 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU641991 | True | 234 | lncRNA | 0.40 | 1 | 98782664 | 98782897 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516022 | LOC105025469 | coding | upstream | 58284 | 98680420 ~ 98724380 (+) |
| LOC118965094 | NA | coding | upstream | 182360 | 98599247 ~ 98600304 (+) |
| LOC118965093 | agrp1 | coding | upstream | 207603 | 98570706 ~ 98575061 (+) |
| hsd11b2 | LOC100135822 | coding | upstream | 294388 | 98436557 ~ 98488276 (+) |
| LOC118965006 | NA | coding | upstream | 576431 | 98204371 ~ 98206233 (+) |
| LOC110525057 | LOC106592677 | coding | downstream | 3817 | 98786714 ~ 98788594 (+) |
| LOC110526849 | vps13c | coding | downstream | 6933 | 98789830 ~ 99009256 (+) |
| LOC118965008 | NA | coding | downstream | 33466 | 98816363 ~ 98818767 (+) |
| LOC110526852 | NA | coding | downstream | 229773 | 99012670 ~ 99013663 (+) |
| LOC118965009 | NA | coding | downstream | 316425 | 99099322 ~ 99102231 (+) |
| G564396 | NA | non-coding | upstream | 26587 | 98755717 ~ 98756077 (+) |
| G564395 | NA | non-coding | upstream | 27219 | 98755188 ~ 98755445 (+) |
| G564363 | NA | non-coding | upstream | 33198 | 98711826 ~ 98749466 (+) |
| G564440 | NA | non-coding | downstream | 9325 | 98792222 ~ 98792716 (+) |
| G564441 | NA | non-coding | downstream | 10172 | 98793069 ~ 98793320 (+) |
| G564442 | NA | non-coding | downstream | 12745 | 98795642 ~ 98799950 (+) |
| G564449 | NA | non-coding | downstream | 46662 | 98829559 ~ 98831675 (+) |
| G564164 | NA | other | upstream | 299362 | 98480580 ~ 98483302 (+) |
| G563596 | NA | other | upstream | 830748 | 97950073 ~ 97951916 (+) |
| G563588 | NA | other | upstream | 859630 | 97922631 ~ 97923034 (+) |
| LOC118936669 | NA | other | upstream | 987038 | 97679917 ~ 97796621 (+) |
| LOC110516620 | LOC106562854 | other | upstream | 1269824 | 97369711 ~ 97529904 (+) |
| G564500 | NA | other | downstream | 285010 | 99067907 ~ 99068597 (+) |
| LOC110498619 | LOC105016647 | other | downstream | 641995 | 99424686 ~ 99469650 (+) |
| G564667 | NA | other | downstream | 754123 | 99537020 ~ 99539242 (+) |
| LOC110513770 | LOC106588105 | other | downstream | 862572 | 99616756 ~ 99663639 (+) |
