XLOC_024811


Basic Information

Item Value
gene id XLOC_024811
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 34641440 ~ 34643204 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049421
CCAGTATAAGATTcagatggtatgataaccttgggtaaACATGTCACGGTTCCACGATAtcacggtattgtaattactgctctaaaatatgctgtttttaaatgtctggTTTCAGAATCAGATCACTGCAGTGCAGCAAAAAAAACACCAAGGCAATGTTgtctaaaaatataataaacacctGAAAACATGCAATCCTATCTATGATTTAGACAAATTATCATTTAATTctcaaaataacatttatttaagttGACAAGACATATCTTGagatgtttgtaaaacaaaaccaataaaaatacaaataaaacaataacttAAATATAGAATCTAACTCCAGAGAAGCTGAGAGTGGctctcttttaaaataaaaaacaaaatctatCAATATTATTCAAGAAATGTATATGAATCCAACAAAAACAAACCCCCACAGCTTACTGAAGGCTGcctgcaaacaaaaacaacagttcAACAGCCATATTGAGCATTTCCATCACTGTCAGTCCAAAAACTACAGTGGTTTCAGTCTAAAATGATGTAAACATCACTAATTGGGATAAATAAACGATTTTACTCGAGAGTATTTCGTTTTAAATCGTGTAAAGTGAAACATTAGGCCGAATGTGAACCCTGCACGCAGCGCCATGTGAGGATCTGTAACTTCCACATGTTTATCGCACGGTTAAACTATCCAACAAACTTGATTAACATTAAAACCCAAAACACTACAGCGCATTTTAACGACTGTCACATCGCTGTGTAATCGAGTAAATCCACTTACAGGCATTGTGAAGAGCTGCAGCTTTTCGCATTCGTGTGTTTTCCTTCGAATCTGGATCTCTCGGACTGAACTGCGCGGGGTTGCCAGGTGCAGCTACATAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049421 True 886 lncRNA 0.36 2 34641440 34643204

Neighbor

gene id symbol gene type direction distance location
XLOC_024810 megf8 coding downstream 9390 34623747 ~ 34632050 (-)
XLOC_024809 NA coding downstream 129338 34478097 ~ 34512102 (-)
XLOC_024808 gcnt3 coding downstream 357296 34274691 ~ 34284144 (-)
XLOC_024807 CU914545.1 coding downstream 386167 34255145 ~ 34255273 (-)
XLOC_024806 foxb1a coding downstream 485288 34154171 ~ 34156152 (-)
XLOC_024812 CABZ01080568.1 coding upstream 19154 34662358 ~ 34670413 (-)
XLOC_024813 NA coding upstream 28864 34672068 ~ 34723976 (-)
XLOC_024814 frs2b coding upstream 84724 34727928 ~ 34740627 (-)
XLOC_024815 gabarapl2 coding upstream 192349 34835553 ~ 34845302 (-)
XLOC_024816 NA coding upstream 290627 34933831 ~ 34938131 (-)
XLOC_024805 NA non-coding downstream 632956 34007807 ~ 34008484 (-)
XLOC_024804 NA non-coding downstream 671375 33963179 ~ 33970065 (-)
XLOC_024803 NA non-coding downstream 689246 33939113 ~ 33952194 (-)
XLOC_024818 NA non-coding upstream 331879 34975083 ~ 34979558 (-)
XLOC_024819 NA non-coding upstream 358951 35002155 ~ 35042110 (-)
XLOC_024823 NA non-coding upstream 408852 35052056 ~ 35116923 (-)

Expression


Co-expression Network