LOC118965196


Basic Information

Item Value
gene id LOC118965196
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 74758 ~ 78747 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052462.1
ttttctttgtagccccgtttgaatgttgcggtagcgcacatttgtacggaatgagCACTATCCAGAAGTTCACCTGGGCAGGCCCAAAAAAGGCAGAAAAGCCAgtcttgttctctctctaccccagcccagGATGAATTTAACGGGGACACGCCTAGACGTGGGCAATCCAGGGATTCAGCTGGCCGTTCTAGATGCTCTCCTTCCCCATCTCACTTCACACACGGGCTTCTACTAGCCAGTCCCACCTCCAGAGCAGGGAGCACAGACGTTTTCCAAATCCCCCCTGTTACTCTACCAGACAAGATTCATCCAGGGCTTCTACTTGCCAGGCCCAACAGAGCCAAGAGCATCGGAGCTCTCACCCTCCCATTCCCTCCGCTAGACCAGAGCTGTTTCCCATGAATAATGCCAAGATATTGGAGGGGAAACGTGTTGGGAGATCAGAGCCCCGAGACTCTTTGAGTTCCATGTCAAGATGATGGAGACGGAGCAAGACTTTGAGCAACTAGAGAAGCAGCGCCGAAGTGTGGATGCACAGAATCTGATGGCTCTTTACCAATGGCCTGATGTCCTTGTTCAACTTCAACGACCATCACGCAATGCAGGGACTAGGAAACACAACTGTGTACTCTGTTGTCAATGGTACCTACAAACATGTAATTATTCTGTAGTATATTTTGTATTAataactgggtggtttgagccctgaaagctgattggctaacagccatggtatatttaagcaataatacATGAGTGCCCATGTGTTATGATGACATTTATCATGGCTGTGAGTGTCATAGCCATAAAAGCGAAGTCCTCTGGGACACACAATACATGGTTACAGTCTGTATCCAGCCGCGCTGAGTTGCGTTGTGCATGTTGGATCCTGTGttggcctttctcatgatggaaaaatacagaagacAGGAACTatgcaatgagttgggggggggggggggcacattcagagcGTGGGGTTGCAGAACAAGaggtcttttgttagataacaggagccaggtgcgagaTAACGGTATGGAGCATGAGAGCCTGGATGTTCTTCAcagcaacagttacatctatcaacagaagcgccaagaggcggggacccgcctgagcgcctgcaataggctgagcaagtttaaaccacgcccagcctctactgtgataggccaactGACGGGTTGGAACTGTATCACAGTATAAAGAAtactgtttacatacatcttgtcagttctctgttctgccctgcgtggtattacagagagcccgtatatacgaaagttgcatttgccatttattacttagctaataaaaaatacatagtatacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052462.1 True 1336 mRNA 0.48 7 74758 78747

Neighbor

gene id symbol gene type direction distance location
LOC110495590 LOC106574982 coding downstream 5658 61099 ~ 69100 (-)
LOC110497043 LOC106592258 coding downstream 46078 20836 ~ 28680 (-)
LOC118965194 LOC106574951 coding upstream 36617 115364 ~ 129260 (-)
LOC110511225 LOC106574981 coding upstream 72042 150789 ~ 167325 (-)
LOC110510711 LOC106575981 coding upstream 109497 188244 ~ 208591 (-)
LOC110519534 LOC106575793 coding upstream 163810 242557 ~ 279418 (-)
LOC110517686 LOC106592870 coding upstream 181702 260449 ~ 297608 (-)
G566344 NA non-coding downstream 38374 35991 ~ 36384 (-)
G566357 NA non-coding upstream 3351 82098 ~ 84923 (-)
G566326 NA non-coding upstream 20697 99444 ~ 100066 (-)
G566364 NA non-coding upstream 46104 124851 ~ 125568 (-)
G566325 NA non-coding upstream 63977 142724 ~ 211406 (-)
G566317 NA non-coding upstream 65127 143874 ~ 146247 (-)
LOC118965198 LOC106595074 other upstream 395137 473884 ~ 477537 (-)
LOC110519328 LOC106574843 other upstream 456272 527767 ~ 541749 (-)
LOC110487686 bora other upstream 621736 700093 ~ 708877 (-)
LOC110528715 LOC106594730 other upstream 752787 831066 ~ 842688 (-)

Expression


Co-expression Network