XLOC_024813


Basic Information

Item Value
gene id XLOC_024813
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 34672068 ~ 34723976 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049108
TCTGTATGTGTACAATCTGTCAAAATGGCAATGGCACAAATcataaaataaaggttttttattttggtctcttgtgaaaacaagatctaaaacagatcAAAAATGGTGGGAATTAAGCCAAATGAAGGTTGTATAACTCaattcggagtctgctactgtccatcagaggtcgcatttcagtcacggacgcatacttgagagtcttcctgactgactgaaatatgtggttttccaccaaggcaactcgGGGTGCTGAactataattggctaaactggcattaagcgggttaaaggaaccaaaacaaagacaggttttggcacgtaacgcacattttcacaGCAGAATATCTTACTTCAGCAGTGTttctcagataaacaagaatattcactgagcatgtttctaaaatatctgccaacattatggcatttttatgctttagaagagtcaaaaagcACCTTTAGTGgtgtttaatatgattttttttattatataaatagcaTGTTTGTTGGCTATATTGTTGTTTTCTCTTGTACACATCTCATAGATGTTTGTCATGTGCTGTCAGTAAATCAACAGATCGACATTCTGGAGCTGAAAGATCTGGAGAAGGAGTATGTTCTCGCTCGGAGTCGGCTGACTTTGGCTCAGCAGGATCCTCCGTCCGCAGCCATCGCAGGAGGAGCGTCTTCTCAGGAAATGGTGGCTCTGCTCGTCCAGGCTGGACTTTTCGACACATCGCTGACTCTTTGCCAGACCTTTAATCTTCCGCTGACTCCAGTGTTTGAGGGACTGACCTTCAAGTGCATTAAACTGCAGTATAAAGGAGACCAGGATCAGACGGAGGTGTGGAACTGGCTCGCTGCTAATCAGCTGCCGACCGTCATCACTACTAAAGAGACCAGTGCGACGGATGAAGCGTGGCGGCTTCTAGCGCATTATTTGGAGAAATTTCCGTCTCACAACGCTCCGCATCATCGCTGCGTCATCAACAAACTGCTGTCACACGGTGTGCCGGCGCCTGATTGGCTAATCAACGCCTACAAGgagGTTGATGCCGCAGCGCTGCTGCGCCTCTATCTGAACTATGATCTTCTGGAAGCCGCAGCGGAGCTCGTGCTGGAGTTTGTGGATGCTCTGCTTGGAAAAGGACATCAGTATTTTGGTATAGAGCGGCCGCTCTCGGCTACAGCGGCTCTGGTGTGGCTGCCGTACACATCCATCGATCAGCTCTTGAGAAACCTGAGCGAAAGTCAGATCAACGAGAAGATGTACAGGAGTCTGCAGGATAAACTGGCCGAATATCACAGACTGGTGGACCAGAGCAGCAGACACAGACTCATGGCCCGCTGAACGTGCGTTTAGGATCAGTAATGCAGAAGTTTTGTTGTGTGCTGTGGTGTTTTTGGGTCGTTTCATGCTGCAGTACAGTCTCTGATTAAACCGCAGTTGTGTGTTTTTTATAAAGGCACTGTTCAAAACATCTTAAACTTTGTATGTTGTGCTCTTTACTTGAGTAATTTAACTAAGTCAtgaaataaaactgttttgtttaatagAAAAGAGGCTGACTTCTGTTATCTGGTAAAGACGAACGTCTTGTTTAGTTGTGTTACTGAAATATGCACAGCTAAAAAAAGATGTTGGTCAATCATTAAAGGCTCAGGAAACACCTAACGACATTTTTTtcgagatgttgacagtcatacgTGTCTcacgctgctataaacactattaggacgcaTATATATTTAACTAACAATGTAAAATTGGTTGGTTTTGCGCTATTTCGAgtaaattcgttcttccggtttaaaaagaaagttttaagctgcgtcacggcgttcagatccttgtgtaaattccagcgtgtagactggatgtctgtaccggcaAGTACATCGGGACGTcattttcatcattaattcataagaaAGACTTGATTCAGGGCGCTCTATTGGGAATGAGTTGCAACTTCAttcatgatagcttcgaagactcctTAGTCGAATTGTTCGGAGTGCCGCattgaaggttttgtttccatttccctgcGACGAGAGCACAGCTTGTGTTTGGACCAGGGCCgacgcgtccatagaggcgacctagggcggcagaatagagagggcggcgtccgcaacacctccctcaacacccgCATCCTCGGTtatgtccgcaacacctccctcagCCCCCGCCGCTTCAGTTATATTCGCGCCTAGGGGGGCAGAATAGAGTGGATGccgtccgcaacacctccctcaaCACCCACGACCTCATttatgcccccccccccccccccacccggcttgatcgtcctttgcctagagcaacatgttcagcttgctccggccctggtgtGCACCCACATTTGTGGATTatagtggtctgctaacacgcgacAGAATCTGATATCTCTGTATTTAGCTCCTTCTCCCACTCCTTCCTAGTTTTGTCAGTGTCTGAATAAACCTTATCTAATAATAAGTTATAGAAAAAATGAGACGGTACCTTTTTCTAATGggttgtgttttgttatattcTCAAGTGTCTGGTGTATGGTTAGAAAATTTTTCCTAGTAAAATcccttatttgtaaatatatgaaAAACTCGGAGGATTGACGATcatatttttatgtaatgtttttttgaCTAACTCATTCTAGTACcacgtggcgcagtgggtagcgctgtcgcctcaaagcaagaagtttgctggtttgagtcccgacatttctgtgtggagtttgcatgttctccccaattcctccgggtgcttctgtttcccccacagtccaaacacatgcgcgctataggtgaattgaataagagTGTAAGGGtgtgt
>TCONS_00048878
CAGTCCCAGCGTGCAGCGCGTGAAGATGGCGGGTGTTCTGGAGCGGAGCTACATTGAGATCTGCGGCTTTGAAAGAGAAACAGTTTCGCGGTTCAGACAGATTACATTAAATCTAGgTGGTGTGGGGGTCTCCTCTGGTGGTGTGAAGTATGCAGACAGTGCTGGCGGATTCTCATACGAGGACAGTGGGAAACTGCTGTCGGTCACCAGCAACAGATTCATCCACTGGGCCACCTCGGGTGATACAGTGCAGCTTGTCGAGCAGTCGCTGGACACCAATCTTCTGAATAATGCTGTGCGCCTGCGCATCCCACAATGCCTCCTCCTGCCCGGAGGCGTTTCCATACAGGAGACACTCAACAATGTCATTATTCTGATCGTCACCAGCCAATCAGTGCATCGCCTGGTGTTACCGCATCCGACCCGCATGTACCGCAGCGATCTGGTCACTGAACTCCAGATGCAGTCCATTTTCACAGACATTGGGAAGCTGAATTTAAATGGCCCAGCTCACAGTTACGTTCTCCCGTTCACACAAGGCCCGCACTCCAGCGCTCCGTCCACGTCTGCGGCCTGGATCAGTCACCAGGGGGAGGCGCTGTTCGCTCTCGCCTCGCCCTCAGGAGGCATCGCTGTGGTCACCTTACCGGCTCATGATCAGGATGGCTCCGTGTCCATTCTGGAGTTGAAGCAGAGTTCAATGATGCAGCGTCTGGCCGGCTGGATGCCCACTGCCATCAGGGGAGATCAGAGCATGTCTGATATGGCCGTCAGTCTGGCTGTTCATCAACTGGAGGACGACACTTTCATTTTCACACTGTGTCAAGATCACAAGCTGCGGATGTGGTCACTAAAGcaTCAGATGTGTGTGCTGGTCACCGATATGCTGGAGTTTCTGCCTGTGGGTCGAGGGGAAGTGAAGGCGTCTCCGGCCCAGGCTCATAAACTGCGactcttcttctcctcctccacCGGTCTGTGCGTCGCCGTCTACCTCTCTGTCCCCAAACGCAGCCAGTTCTGTGTGCTGCAGCTGGTGGCCAATGAGAGCAGCCGCTACAGCCTGGACCACATCTCCACGCTGTTCTCCACACAGGAGACGCTGGTGGATTTTGTCTTGACGGCAACTGATATTTGGGCTCTGTGGCTGGATAACGACAACCAGACGGTGGCGAAGTACATCAGCTTTGAGCATAACACTACAGGCATGTGGAACCAGGTGTTCGTCCAGCCGTCGCCAGAGGAAGAAGTTCACATCGGAGAAGACCAAGATCCTCGGGAGATATATCTGGACGTGCTTTTTTCACCGCTACGCTTCACAGCCTCGGCCATCATCAAAGCTTTACAGATTTATAAGCGAGGTCCAGAACGATATTCGGATCTATCATGGGAGGAGCTGAAGAAAGAGGTCACGGTCACAGTGGAAAGCGAGcttcAGGGCAGTGTGACGGAGTACGAGTTCTGTCAGGAGGATTATCGTCTGCTCCAGGTGGAGTTTTGGTCCAAGTTTTACGCCTGCTGTCTGCAGTACCAGGACGTCCTGTCCACACCTCTCGCCCTGCACGTCAGCCCCTCCACCGGCATGATCTGCGTCCTCAAGAAGGGCTTCGTGTCTTTCTTGTTGCCCTGCTTTGCTGTGGACCACCTGTACCTGTCCTCCGATGAATACTTGTTTTCTGAAGAGGAGACTCCTATTGCTGAGGATGCAGAAGTGAGCCGGGATGTCCTGCAGCTGGTTCAGTGTCTGCGTCTGGTGAACGAGTCTCTTCCAGAAGAAATGGCCTACGAGATGGACAAAGCCCTGGACGAGCTGCTGTCCCCGGAGAAAGTGTCCGAGAAGATCCTGGAGAGCCTTTTGGCCAATGACACTGGGAACGTGATTGGCGACATTGCAAACAAACTGCAGGACATCTATAACCCCATCGCTGCCATGAACATGCTGCTCCGAGAGCTGGACCTGGAGACTGACGCCGAGCCTGACGCCAGACACGCAGGTCAGTCTCTGCGAGTGCGCATCAGTCTGTCTCAGCTGTACGGCAGCAGCGTCGCTGCTAGTCTGATCTGTCAGGCCGTTTGTCAGACCGCCATGACCCGAACGCTGCTCTGCAGAGACCTGCTCATCCTGCAGCAGCTCTACCTGCGCATCGGAGAAAATGCGTTTATTTCCGGCGGTCCTCAGTTGCTGCAGCTCCAGCAGGACTTGATTCCTCGATGCTCGAATCTGCTTTGCACTTATCACCTGCTCAAACAGATGAGCCTGACGCTCTCCTCATCTGTCCCACTAGACATACTAAATGCAGATCTTCAGCATCTCTCAGTTCTGGAGCTCTCCGACTCCTCCACTCCTGCGTCCAGCAGATCAGTGTTGAATCCTCAGACCGTGGTGGAGTTGTTCTACCAGAGCGTGGCCCGTAAAACCATCATGTCTCAGATCTTCTCCCAGCAGGACATGGAGAGCGATCAGAGCGTCTTACACTGGCCTCAGATGATCTCCAGTGTCCTGACGCTGCTCTGCCAGGCTCTCTGGCCCAGCAATCCCAGTTTCCTCTTTCCCGAATGCCTGATGGGAAACTGCCAGTACGCACAGCTCCAGgaataTGTGCGGTTAGTCGGGCCCTGGTGTCAGGTGAACGTGGGGTCTTACCGTTTTGTGTTGGGTCAGTGTTATCTGGCCAGCGGTGAGGGGCAAAAGGCATTGCAGTGTTTCCAGGAAGCTGCGACTGAGGTGAATAAAGAAGAGTTTTTAATGAAGCTCACAGGTTCAGATGAAGAAACGGCGACCGCTCCACGATTGCTTTACTACAACAAGGTCCTGCGGTTATTGGAGGATATTGGGTTGCCGGAGCTTGTGATTGAATTGGCAACGCTGGCCGTTTCTGAAGCCACCGATGACAAGAGAAGCCAGGCTGCTCTGTGGACTCGTATCTTCAAGCATCATCTGGATCTCGGACACAACAGTCAGGCGTATGAAGCCCTGACGCAAAACCCGGATTCTAGCAGGCAGCTGGATTGTCTCCGGCAGCTGGTGGTGGTTCTGTGTGAACGCGCACAACTCCGAGATCTCGTCCAGTTCACATATGTTAATTTGCATGACGAGGTTGTCAGCATTATTGAGTCTCGAGCGAGAGCCGTGGACCTCATGACACACAACTACTACGAGCTTCTGTACGCTTTTCACATCAATCGGCACAACTATAGAAAAGcggGTACGGTGATGTTTGAGTATGGTATGCGTCTGGGTCGGGAAGTGCGAACTCTTCGAGGGCTTCAGAAGCAGGTGAACTGTTACCTGGCCGCTCTAAACTGCCTGCGTCTCGTTAGTCCTGATTACGCCTGGATTGTGCAGCCTTCGTCTGGAGCCGCGTATGAACGACCAGGCGCATCCCCGAAAAGGACCCATGATGGAGAATTTGCTGAAAGTCCAGTAAATCAACAGATCGACATTCTGGAGCTGAAAGATCTGGAGAAGGAGTATGTTCTCGCTCGGAGTCGGCTGACTTTGGCTCAGCAGGATCCTCCGTCCGCAGCCATCGCAGGT
>TCONS_00048879
CTGGCCCTTTAAGTGTTTGAAAGGCGGAAGCGCGCAGCTCAGTCCCAGCGTGCAGCGCGTGAAGATGGCGGGTGTTCTGGAGCGGAGCTACATTGAGATCTGCGGCTTTGAAAGAGAAACAGTTTCGCGGTTCAGACAGATTACATTAAATCTAGgTGGTGTGGGGGTCTCCTCTGGTGGTGTGAAGTATGCAGACAGTGCTGGCGGATTCTCATACGAGGACAGTGGGAAACTGCTGTCGGTCACCAGCAACAGATTCATCCACTGGGCCACCTCGGGTGATACAGTGCAGCTTGTCGAGCAGTCGCTGGACACCAATCTTCTGAATAATGCTGTGCGCCTGCGCATCCCACAATGCCTCCTCCTGCCCGGAGGCGTTTCCATACAGGAGACACTCAACAATGTCATTATTCTGATCGTCACCAGCCAATCAGTGCATCGCCTGGTGTTACCGCATCCGACCCGCATGTACCGCAGCGATCTGGTCACTGAACTCCAGATGCAGTCCATTTTCACAGACATTGGGAAGCTGAATTTAAATGGCCCAGCTCACAGTTACGTTCTCCCGTTCACACAAGGCCCGCACTCCAGCGCTCCGTCCACGTCTGCGGCCTGGATCAGTCACCAGGGGGAGGCGCTGTTCGCTCTCGCCTCGCCCTCAGGAGGCATCGCTGTGGTCACCTTACCGGCTCATGATCAGGATGGCTCCGTGTCCATTCTGGAGTTGAAGCAGAGTTCAATGATGCAGCGTCTGGCCGGCTGGATGCCCACTGCCATCAGGGGAGATCAGAGCATGTCTGATATGGCCGTCAGTCTGGCTGTTCATCAACTGGAGGACGACACTTTCATTTTCACACTGTGTCAAGATCACAAGCTGCGGATGTGGTCACTAAAGcaTCAGATGTGTGTGCTGGTCACCGATATGCTGGAGTTTCTGCCTGTGGGTCGAGGGGAAGTGAAGGCGTCTCCGGCCCAGGCTCATAAACTGCGactcttcttctcctcctccacCGGTCTGTGCGTCGCCGTCTACCTCTCTGTCCCCAAACGCAGCCAGTTCTGTGTGCTGCAGCTGGTGGCCAATGAGAGCAGCCGCTACAGCCTGGACCACATCTCCACGCTGTTCTCCACACAGGAGACGCTGGTGGATTTTGTCTTGACGGCAACTGATATTTGGGCTCTGTGGCTGGATAACGACAACCAGACGGTGGCGAAGTACATCAGCTTTGAGCATAACACTACAGGCATGTGGAACCAGGTGTTCGTCCAGCCGTCGCCAGAGGAAGAAGTTCACATCGGAGAAGACCAAGATCCTCGGGAGATATATCTGGACGTGCTTTTTTCACCGCTACGCTTCACAGCCTCGGCCATCATCAAAGCTTTACAGATTTATAAGCGAGGTCCAGAACGATATTCGGATCTATCATGGGAGGAGCTGAAGAAAGAGGTCACGGTCACAGTGGAAAGCGAGcttcAGGGCAGTGTGACGGAGTACGAGTTCTGTCAGGAGGATTATCGTCTGCTCCAGGTGGAGTTTTGGTCCAAGTTTTACGCCTGCTGTCTGCAGTACCAGGACGTCCTGTCCACACCTCTCGCCCTGCACGTCAGCCCCTCCACCGGCATGATCTGCGTCCTCAAGAAGGGCTTCGTGTCTTTCTTGTTGCCCTGCTTTGCTGTGGACCACCTGTACCTGTCCTCCGATGAATACTTGTTTTCTGAAGAGGAGACTCCTATTGCTGAGGATGCAGAAGTGAGCCGGGATGTCCTGCAGCTGGTTCAGTGTCTGCGTCTGGTGAACGAGTCTCTTCCAGAAGAAATGGCCTACGAGATGGACAAAGCCCTGGACGAGCTGCTGTCCCCGGAGAAAGTGTCCGAGAAGATCCTGGAGAGCCTTTTGGCCAATGACACTGGGAACGTGATTGGCGACATTGCAAACAAACTGCAGGACATCTATAACCCCATCGCTGCCATGAACATGCTGCTCCGAGAGCTGGACCTGGAGACTGACGCCGAGCCTGACGCCAGACACGCAGGTCAGTCTCTGCGAGTGCGCATCAGTCTGTCTCAGCTGTACGGCAGCAGCGTCGCTGCTAGTCTGATCTGTCAGGCCGTTTGTCAGACCGCCATGACCCGAACGCTGCTCTGCAGAGACCTGCTCATCCTGCAGCAGCTCTACCTGCGCATCGGAGAAAATGCGTTTATTTCCGGCGGTCCTCAGTTGCTGCAGCTCCAGCAGGACTTGATTCCTCGATGCTCGAATCTGCTTTGCACTTATCACCTGCTCAAACAGATGAGCCTGACGCTCTCCTCATCTGTCCCACTAGACATACTAAATGCAGATCTTCAGCATCTCTCAGTTCTGGAGCTCTCCGACTCCTCCACTCCTGCGTCCAGCAGATCAGTGTTGAATCCTCAGACCGTGGTGGAGTTGTTCTACCAGAGCGTGGCCCGTAAAACCATCATGTCTCAGATCTTCTCCCAGCAGGACATGGAGAGCGATCAGAGCGTCTTACACTGGCCTCAGATGATCTCCAGTGTCCTGACGCTGCTCTGCCAGGCTCTCTGGCCCAGCAATCCCAGTTTCCTCTTTCCCGAATGCCTGATGGGAAACTGCCAGTACGCACAGCTCCAGgaataTGTGCGGTTAGTCGGGCCCTGGTGTCAGGTGAACGTGGGGTCTTACCGTTTTGTGTTGGGTCAGTGTTATCTGGCCAGCGGTGAGGGGCAAAAGGCATTGCAGTGTTTCCAGGAAGCTGCGACTGAGGTGAATAAAGAAGAGTTTTTAATGAAGCTCACAGGTTCAGATGAAGAAACGGCGACCGCTCCACGATTGCTTTACTACAACAAGGTCCTGCGGTTATTGGAGGATATTGGGTTGCCGGAGCTTGTGATTGAATTGGCAACGCTGGCCGTTTCTGAAGCCACCGATGACAAGAGAAGCCAGGCTGCTCTGTGGACTCGTATCTTCAAGCATCATCTGGATCTCGGACACAACAGTCAGGCGTATGAAGCCCTGACGCAAAACCCGGATTCTAGCAGGCAGCTGGATTGTCTCCGGCAGCTGGTGGTGGTTCTGTGTGAACGCGCACAACTCCGAGATCTCGTCCAGTTCACATATGTTAATTTGCATGACGAGGTTGTCAGCATTATTGAGTCTCGAGCGAGAGCCGTGGACCTCATGACACACAACTACTACGAGCTTCTGTACGCTTTTCACATCAATCGGCACAACTATAGAAAAGcggGTACGGTGATGTTTGAGTATGGTATGCGTCTGGGTCGGGAAGTGCGAACTCTTCGAGGGCTTCAGAAGCAGGTGAACTGTTACCTGGCCGCTCTAAACTGCCTGCGTCTCGTTAGTCCTGATTACGCCTGGATTGTGCAGCCTTCGTCTGGAGCCGCGTATGAACGACCAGGCGCATCCCCGAAAAGGACCCATGATGGAGAATTTGCTGAAAGTCCAG

Function

GO:

id name namespace
GO:0006302 double-strand break repair biological_process
GO:0022402 cell cycle process biological_process
GO:0098813 nuclear chromosome segregation biological_process
GO:0006325 chromatin organization biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:1901836 regulation of transcription of nucleolar large rRNA by RNA polymerase I biological_process
GO:0071103 DNA conformation change biological_process
GO:0006996 organelle organization biological_process
GO:0042790 nucleolar large rRNA transcription by RNA polymerase I biological_process
GO:0043414 macromolecule methylation biological_process
GO:0007049 cell cycle biological_process
GO:0051276 chromosome organization biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0007059 chromosome segregation biological_process
GO:0033554 cellular response to stress biological_process
GO:1903047 mitotic cell cycle process biological_process
GO:0000724 double-strand break repair via homologous recombination biological_process
GO:0000725 recombinational repair biological_process
GO:0006259 DNA metabolic process biological_process
GO:0006260 DNA replication biological_process
GO:0006261 DNA-dependent DNA replication biological_process
GO:0006281 DNA repair biological_process
GO:0016043 cellular component organization biological_process
GO:0044422 obsolete organelle part cellular_component
GO:0044424 obsolete intracellular part cellular_component
GO:0044428 obsolete nuclear part cellular_component
GO:0043596 nuclear replication fork cellular_component
GO:0070013 intracellular organelle lumen cellular_component
GO:0043601 nuclear replisome cellular_component
GO:0044446 obsolete intracellular organelle part cellular_component
GO:0044464 obsolete cell part cellular_component
GO:0032991 protein-containing complex cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0005623 obsolete cell cellular_component
GO:0005634 nucleus cellular_component
GO:0005657 replication fork cellular_component
GO:0031974 membrane-enclosed lumen cellular_component
GO:0005694 chromosome cellular_component
GO:0030894 replisome cellular_component
GO:0031981 nuclear lumen cellular_component
GO:0043226 organelle cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043228 non-membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component
GO:0043232 intracellular non-membrane-bounded organelle cellular_component
GO:0043233 organelle lumen cellular_component
GO:0003676 nucleic acid binding molecular_function
GO:0003682 chromatin binding molecular_function
GO:0003697 single-stranded DNA binding molecular_function
GO:0051536 iron-sulfur cluster binding molecular_function
GO:0051539 4 iron, 4 sulfur cluster binding molecular_function
GO:0051540 metal cluster binding molecular_function
GO:0140097 catalytic activity, acting on DNA molecular_function
GO:0018024 histone-lysine N-methyltransferase activity molecular_function

KEGG:

id description
ko03050 Proteasome
ko03230 Viral genome structure
ko05164 Influenza A
ko05169 Epstein-Barr virus infection
ko03200 Viral proteins

ZFIN:

id description
ZDB-GENE-040426-1603 Predicted to be a structural constituent of nuclear pore. Predicted to be located in nucleus. Predicted to be part of nuclear pore. Human ortholog(s) of this gene implicated in nephrotic syndrome type 19. Orthologous to human NUP160 (nucleoporin 160).

Ensembl:

ensembl_id ENSDARG00000027140

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049108 False 2848 lncRNA 0.45 7 34672068 34681696
TCONS_00048878 False 3538 mRNA 0.54 29 34681018 34723937
TCONS_00048879 True 3464 mRNA 0.54 28 34695789 34723976

Neighbor

gene id symbol gene type direction distance location
XLOC_024812 CABZ01080568.1 coding downstream 1655 34662358 ~ 34670413 (-)
XLOC_024811 NA coding downstream 28864 34641440 ~ 34643204 (-)
XLOC_024810 megf8 coding downstream 40018 34623747 ~ 34632050 (-)
XLOC_024809 NA coding downstream 159966 34478097 ~ 34512102 (-)
XLOC_024808 gcnt3 coding downstream 387924 34274691 ~ 34284144 (-)
XLOC_024814 frs2b coding upstream 3952 34727928 ~ 34740627 (-)
XLOC_024815 gabarapl2 coding upstream 111577 34835553 ~ 34845302 (-)
XLOC_024816 NA coding upstream 209855 34933831 ~ 34938131 (-)
XLOC_024817 cdk10 coding upstream 232392 34956368 ~ 34973211 (-)
XLOC_024818 NA coding upstream 251107 34975083 ~ 34979558 (-)
XLOC_024807 CU914545.1 non-coding downstream 416795 34255145 ~ 34255273 (-)
XLOC_024805 NA non-coding downstream 663584 34007807 ~ 34008484 (-)
XLOC_024804 NA non-coding downstream 702003 33963179 ~ 33970065 (-)
XLOC_024819 NA non-coding upstream 278179 35002155 ~ 35042110 (-)
XLOC_024823 NA non-coding upstream 328080 35052056 ~ 35116923 (-)
XLOC_024826 NA non-coding upstream 378149 35102125 ~ 35139520 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000122_00071258_00126894 NUP160 coding CI01000122 null 71258 ~ 126894 (-)