LOC110511225 (LOC106574981)


Basic Information

Item Value
gene id LOC110511225
gene name LOC106574981
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 150789 ~ 167325 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036981896.1
tttagcagatgaacactggagtgatagatgagtagatgatgatgagcagatgagGACAAACCCAGCCTGCTTCTCTCCTTCCACAGTGAGCccaaacctacagtcactgggtcctgattgtgacagtggagcccagtttgtactgcaggatccagagatggcatcagtgaagctggaagactgcagtcaaacactggagctgaatgtcaacattaaagatgaagaagaggaggagaagattgggGAATCTGTTTCTCATGgagaccaTGTTGAGACATTCTCTACATCCAGAGAGCAACAGCAGAAAGATCACAGAGCTAAGAGGTCTCACCCCTGCCCACATTGTGAGGAAATATTCCCATTTCTATCAAAGCTAAAAGTACACCTAAAAATACACAGAGGAGAGAATCAATATTCCTATACTGACGGTGGGAAGAATTTCACAACATCCAAGACTGTGACAGTTCATCAGAGAGTGcatacaggagagaagctgttctcctgctctgactgtgtaaaatgcttcacaacatcagctagactaaaagttcatcagagaacacacacaggagagaagccttactcctgctctgactgtgcgGCGAGTTTCTCTCTACTGTGCAACTTAAAACGTCatgaacgtatacacacaggagagaagctttactcctgctctgactgtgcgGCGAGTTTCTCTCTACTGTGCAACTTAAAACgacatgaacgtatacacacaggagagaagccttattcctGCTCTGATTGTGGAAACAGTTATTCTCTACTGGGCCACTTAAAAAGACACCAAcatatacatacaggagagaagccttactcctgctctgactgtggaaagagtttctctcgACTGGGCCACTTAAAAACACATAAAcatatacatacaggagagaagccttactcctgctctgactgtgtaaAATGCTTCATAACATCATCTGAGCTAAAAGTTcataagagaacacacacaggagagaagccttactcctgctcttattgtgtaaaatgcttcacaacatcaactaGGCTAAAAGTTcataagagaacacacacaggagagaagccttacatcTGTTCTAACTGTGCGGCAAGTTTCTCTCTACTGTGCCACTTAAAACGACATGAaagtatacacacaggagagaagccttacaccTGCTCTGACTGTGCAGCAAGTTTCTCTCTACTGTGCAACTTAAAACGACATGaacgaatacacacaggagagaagccttatcactgcaCTGACTGTGAGAAGAGATTCTACAGATTGGGCCATTTAAAAAGACACCAATGTGTACATAAAGGAGAGAAGCCTCATCACCTCTCTCAGACCAGCTAAGATTAGACACTCCACTTAATTCTCATCTCATAAAATAATTTGCAACGTTGAATTGGATCAAATGAAGAAAGTGTAGAACACTCTGTTCTAATCCTATTGTTTCTCACTGTGAGAGAACTGTGCAGAGGAAAGAGAGCGTTCTAGAATGTTAGCCTCTCTTTACTTTACTGATCAGTGTGTACCTTGTCAGTTTTGGTGTGTTTTGTTAGCTTCTACTGTAAAGATATTGACATGACCTTGGATTTGCCCTTAGGGTTGAATATCCTCTGTGAGGCTTCTCACAGTGGAGTCTGACGGTTAACAGGGTGGGACTGCTTCCCTCTACAGTTGTCTGTGGGAATGAGATAGTAGACACaacctacactgagtgtacaaaacattaaggacacctgctctttccatgaccagCTGAacccaggtgaaagttatgatccttAATGATTTAGTTGTTGTGTATTtgttatggatctccattagctttcaacaaacaaacaaaactgcCGTTGCAGTGGGCTAAGGAATGAAAACACTGGAAAATTGGAACCATACTGCCTGGTCTGATGAACCCTGGTTCCTGTTGTTTCACGCTGATGGGAGGACTGGGGTATGGAGGAAACCACGAGGACAtacatccagtggtggaaaatgtaCCTAACTGTCAGACTGAgtgaaagtaaagataccttaatagaaaatgactcaagtaaaagtcacccagtaaaatactactggagtaaaagtatttggttgtaaatatacttaagtatcaaaagtaaaagtattaatcatttcaaa
>XM_036981894.1
AGGCGCGCatcattcttcagaataaaggaTACGTCAGAATTGTGCAGTCGAGACGACAACTTCTGTGTCCGTATTACTACTGATTAAGTCTGAGGCcagtaacatcaacagtgaggacaaacccaacctgcctctctccttccacactgagtagaaacctacagtcactgggtccaGATTGTGACAGCGGAgcccagtttgcactgcaggatccagagatggcatcagtgaagctggaagactgcagtcaaacactggagctgaatgtcatcattaaagatgaagaagaggaggaggagattggAATATCTGTTTCTCATGGTATGAGGCCGGTAACATCAACACTGAGGAcaaacccagcctgcctctctccttccaaactgagtccaaacctacagtcactgggtcctgattgtgacagtggagcccagtttgtactgcaggatccagagatggcatcagtgaagctggaagactgcagtcaaacactggagctgaatgtcaacattaaagatgaagaagaggaggaggagattggGAAATCTGTTAATCATGgagaccaTGTTGAGACATTCTCTACATCCAGAGAGCAACAGCAGAAAGATCACAGAGCTAAGAGGTCTCACCCCTGCCCACATTGTGAGGAAATATTCCCATTTCTATCAAAGCTAAAAGTACACCTAAAAATACACAGAGGAGAGAATCAATATTCCTATACTGACGGTGGGAAGAATTTCACAACATCCAAGACTGTGACAGTTCATCAGAGAGTGcatacaggagagaagctgttctcctgctctgactgtgtaaaatgcttcacaacatcagctagactaaaagttcatcagagaacacacacaggagagaagccttactcctgctctgactgtgcgGCGAGTTTCTCTCTACTGTGCAACTTAAAACGTCatgaacgtatacacacaggagagaagctttactcctgctctgactgtgcgGCGAGTTTCTCTCTACTGTGCAACTTAAAACgacatgaacgtatacacacaggagagaagccttattcctGCTCTGATTGTGGAAACAGTTATTCTCTACTGGGCCACTTAAAAAGACACCAAcatatacatacaggagagaagccttactcctgctctgactgtggaaagagtttctctcgACTGGGCCACTTAAAAACACATAAAcatatacatacaggagagaagccttactcctgctctgactgtgtaaAATGCTTCATAACATCATCTGAGCTAAAAGTTcataagagaacacacacaggagagaagccttactcctgctcttattgtgtaaaatgcttcacaacatcaactaGGCTAAAAGTTcataagagaacacacacaggagagaagccttacatcTGTTCTAACTGTGCGGCAAGTTTCTCTCTACTGTGCCACTTAAAACGACATGAaagtatacacacaggagagaagccttacaccTGCTCTGACTGTGCAGCAAGTTTCTCTCTACTGTGCAACTTAAAACGACATGaacgaatacacacaggagagaagccttatcactgcaCTGACTGTGAGAAGAGATTCTACAGATTGGGCCATTTAAAAAGACACCAATGTGTACATAAAGGAGAGAAGCCTCATCACCTCTCTCAGACCAGCTAAGATTAGACACTCCACTTAATTCTCATCTCATAAAATAATTTGCAACGTTGAATTGGATCAAATGAAGAAAGTGTAGAACACTCTGTTCTAATCCTATTGTTTCTCACTGTGAGAGAACTGTGCAGAGGAAAGAGAGCGTTCTAGAATGTTAGCCTCTCTTTACTTTACTGATCAGTGTGTACCTTGTCAGTTTTGGTGTGTTTTGTTAGCTTCTACTGTAAAGATATTGACATGACCTTGGATTTGCCCTTAGGGTTGAATATCCTCTGTGAGGCTTCTCACAGTGGAGTCTGACGGTTAACAGGGTGGGACTGCTTCCCTCTACAGTTGTCTGTGGGAATGAGATAGTAGACACaacctacactgagtgtacaaaacattaaggacacctgctctttccatgaccagCTGAacccaggtgaaagttatgatccttAATGATTTAGTTGTTGTGTATTtgttatggatctccattagctttcaacaaacaaacaaaactgcCGTTGCAGTGGGCTAAGGAATGAAAACACTGGAAAATTGGAACCATACTGCCTGGTCTGATGAACCCTGGTTCCTGTTGTTTCACGCTGATGGGAGGACTGGGGTATGGAGGAAACCACGAGGACAtacatccagtggtggaaaatgtaCCTAACTGTCAGACTGAgtgaaagtaaagataccttaatagaaaatgactcaagtaaaagtcacccagtaaaatactactggagtaaaagtatttggttgtaaatatacttaagtatcaaaagtaaaagtattaatcatttcaaa
>XM_036981895.1
CAGGCGCGCatcattcttcagaataaaggaTACGTCAGAATTGTGCAGTCGAGACGACAACTTCTGTGTCCGTATTACTACTGATTAAGTCTGAGGCcagtaacatcaacagtgaggacaaacccaacctgcctctctccttccacactgagtagaaacctacagtcactgggtccaGATTGTGACAGCGGAgcccagtttgcactgcaggatccagagatggcatcagtgaagctggaagactgcagtcaaacactggagctgaatgtcatcattaaagatgaagaagaggaggaggagattggAATATCTGTTTCTCATGtcattggcagcagagaagtgGAAGAACATGTGGCCAAATGAggacttggctttggggatgaccagtgaaatatacctgctggatcgcttgctacggGTATGAGGCCGGTAACATCAACACTGAGGAcaaacccagcctgcctctctccttccaaactgagtccaaacctacagtcactgggtcctgattgtgacagtggagcccagtttgtactgcaggatccagagatggcatcagtgaagctggaagactgcagtcaaacactggagctgaatgtcaacattaaagatgaagaagaggaggaggagattggGAAATCTGTTAATCATGgagaccaTGTTGAGACATTCTCTACATCCAGAGAGCAACAGCAGAAAGATCACAGAGCTAAGAGGTCTCACCCCTGCCCACATTGTGAGGAAATATTCCCATTTCTATCAAAGCTAAAAGTACACCTAAAAATACACAGAGGAGAGAATCAATATTCCTATACTGACGGTGGGAAGAATTTCACAACATCCAAGACTGTGACAGTTCATCAGAGAGTGcatacaggagagaagctgttctcctgctctgactgtgtaaaatgcttcacaacatcagctagactaaaagttcatcagagaacacacacaggagagaagccttactcctgctctgactgtgcgGCGAGTTTCTCTCTACTGTGCAACTTAAAACGTCatgaacgtatacacacaggagagaagctttactcctgctctgactgtgcgGCGAGTTTCTCTCTACTGTGCAACTTAAAACgacatgaacgtatacacacaggagagaagccttattcctGCTCTGATTGTGGAAACAGTTATTCTCTACTGGGCCACTTAAAAAGACACCAAcatatacatacaggagagaagccttactcctgctctgactgtggaaagagtttctctcgACTGGGCCACTTAAAAACACATAAAcatatacatacaggagagaagccttactcctgctctgactgtgtaaAATGCTTCATAACATCATCTGAGCTAAAAGTTcataagagaacacacacaggagagaagccttactcctgctcttattgtgtaaaatgcttcacaacatcaactaGGCTAAAAGTTcataagagaacacacacaggagagaagccttacatcTGTTCTAACTGTGCGGCAAGTTTCTCTCTACTGTGCCACTTAAAACGACATGAaagtatacacacaggagagaagccttacaccTGCTCTGACTGTGCAGCAAGTTTCTCTCTACTGTGCAACTTAAAACGACATGaacgaatacacacaggagagaagccttatcactgcaCTGACTGTGAGAAGAGATTCTACAGATTGGGCCATTTAAAAAGACACCAATGTGTACATAAAGGAGAGAAGCCTCATCACCTCTCTCAGACCAGCTAAGATTAGACACTCCACTTAATTCTCATCTCATAAAATAATTTGCAACGTTGAATTGGATCAAATGAAGAAAGTGTAGAACACTCTGTTCTAATCCTATTGTTTCTCACTGTGAGAGAACTGTGCAGAGGAAAGAGAGCGTTCTAGAATGTTAGCCTCTCTTTACTTTACTGATCAGTGTGTACCTTGTCAGTTTTGGTGTGTTTTGTTAGCTTCTACTGTAAAGATATTGACATGACCTTGGATTTGCCCTTAGGGTTGAATATCCTCTGTGAGGCTTCTCACAGTGGAGTCTGACGGTTAACAGGGTGGGACTGCTTCCCTCTACAGTTGTCTGTGGGAATGAGATAGTAGACACaacctacactgagtgtacaaaacattaaggacacctgctctttccatgaccagCTGAacccaggtgaaagttatgatccttAATGATTTAGTTGTTGTGTATTtgttatggatctccattagctttcaacaaacaaacaaaactgcCGTTGCAGTGGGCTAAGGAATGAAAACACTGGAAAATTGGAACCATACTGCCTGGTCTGATGAACCCTGGTTCCTGTTGTTTCACGCTGATGGGAGGACTGGGGTATGGAGGAAACCACGAGGACAtacatccagtggtggaaaatgtaCCTAACTGTCAGACTGAgtgaaagtaaagataccttaatagaaaatgactcaagtaaaagtcacccagtaaaatactactggagtaaaagtatttggttgtaaatatacttaagtatcaaaagtaaaagtattaatcatttcaaa
>XM_036981893.1
CTGGTTTTGGGGAGGGAAATATGGCGAAGCGGAAGTGCTGTTCAAGTCTGATATCTCCCAGTTGAGTAAAGTTGGTCAGAAGGAATGGAAGACGGAGACGACGAAAAATGGAGCAAACCGACCAAAGATTAAGTCTGAGGCcagtaacatcaacagtgaggacaaacccaacctgcctctctccttccacactgagtagaaacctacagtcactgggtccaGATTGTGACAGCGGAgcccagtttgcactgcaggatccagagatggcatcagtgaagctggaagactgcagtcaaacactggagctgaatgtcatcattaaagatgaagaagaggaggaggagattggAATATCTGTTTCTCATGGTATGAGGCCGGTAACATCAACACTGAGGAcaaacccagcctgcctctctccttccaaactgagtccaaacctacagtcactgggtcctgattgtgacagtggagcccagtttgtactgcaggatccagagatggcatcagtgaagctggaagactgcagtcaaacactggagctgaatgtcaacattaaagatgaagaagaggaggaggagattggGAAATCTGTTAATCATGgagaccaTGTTGAGACATTCTCTACATCCAGAGAGCAACAGCAGAAAGATCACAGAGCTAAGAGGTCTCACCCCTGCCCACATTGTGAGGAAATATTCCCATTTCTATCAAAGCTAAAAGTACACCTAAAAATACACAGAGGAGAGAATCAATATTCCTATACTGACGGTGGGAAGAATTTCACAACATCCAAGACTGTGACAGTTCATCAGAGAGTGcatacaggagagaagctgttctcctgctctgactgtgtaaaatgcttcacaacatcagctagactaaaagttcatcagagaacacacacaggagagaagccttactcctgctctgactgtgcgGCGAGTTTCTCTCTACTGTGCAACTTAAAACGTCatgaacgtatacacacaggagagaagctttactcctgctctgactgtgcgGCGAGTTTCTCTCTACTGTGCAACTTAAAACgacatgaacgtatacacacaggagagaagccttattcctGCTCTGATTGTGGAAACAGTTATTCTCTACTGGGCCACTTAAAAAGACACCAAcatatacatacaggagagaagccttactcctgctctgactgtggaaagagtttctctcgACTGGGCCACTTAAAAACACATAAAcatatacatacaggagagaagccttactcctgctctgactgtgtaaAATGCTTCATAACATCATCTGAGCTAAAAGTTcataagagaacacacacaggagagaagccttactcctgctcttattgtgtaaaatgcttcacaacatcaactaGGCTAAAAGTTcataagagaacacacacaggagagaagccttacatcTGTTCTAACTGTGCGGCAAGTTTCTCTCTACTGTGCCACTTAAAACGACATGAaagtatacacacaggagagaagccttacaccTGCTCTGACTGTGCAGCAAGTTTCTCTCTACTGTGCAACTTAAAACGACATGaacgaatacacacaggagagaagccttatcactgcaCTGACTGTGAGAAGAGATTCTACAGATTGGGCCATTTAAAAAGACACCAATGTGTACATAAAGGAGAGAAGCCTCATCACCTCTCTCAGACCAGCTAAGATTAGACACTCCACTTAATTCTCATCTCATAAAATAATTTGCAACGTTGAATTGGATCAAATGAAGAAAGTGTAGAACACTCTGTTCTAATCCTATTGTTTCTCACTGTGAGAGAACTGTGCAGAGGAAAGAGAGCGTTCTAGAATGTTAGCCTCTCTTTACTTTACTGATCAGTGTGTACCTTGTCAGTTTTGGTGTGTTTTGTTAGCTTCTACTGTAAAGATATTGACATGACCTTGGATTTGCCCTTAGGGTTGAATATCCTCTGTGAGGCTTCTCACAGTGGAGTCTGACGGTTAACAGGGTGGGACTGCTTCCCTCTACAGTTGTCTGTGGGAATGAGATAGTAGACACaacctacactgagtgtacaaaacattaaggacacctgctctttccatgaccagCTGAacccaggtgaaagttatgatccttAATGATTTAGTTGTTGTGTATTtgttatggatctccattagctttcaacaaacaaacaaaactgcCGTTGCAGTGGGCTAAGGAATGAAAACACTGGAAAATTGGAACCATACTGCCTGGTCTGATGAACCCTGGTTCCTGTTGTTTCACGCTGATGGGAGGACTGGGGTATGGAGGAAACCACGAGGACAtacatccagtggtggaaaatgtaCCTAACTGTCAGACTGAgtgaaagtaaagataccttaatagaaaatgactcaagtaaaagtcacccagtaaaatactactggagtaaaagtatttggttgtaaatatacttaagtatcaaaagtaaaagtattaatcatttcaaa

Function

NR:

description
PREDICTED: zinc finger protein OZF-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036981896.1 False 2155 mRNA 0.42 2 150789 155424
XM_036981894.1 False 2450 mRNA 0.43 4 150789 166672
XM_036981895.1 False 2547 mRNA 0.43 5 150789 166673
XM_036981893.1 True 2495 mRNA 0.43 4 150789 167325

Neighbor

gene id symbol gene type direction distance location
LOC118965194 LOC106574951 coding downstream 21529 115364 ~ 129260 (-)
LOC118965196 NA coding downstream 72042 74758 ~ 78747 (-)
LOC110495590 LOC106574982 coding downstream 81689 61099 ~ 69100 (-)
LOC110497043 LOC106592258 coding downstream 122109 20836 ~ 28680 (-)
LOC110510711 LOC106575981 coding upstream 20919 188244 ~ 208591 (-)
LOC110519534 LOC106575793 coding upstream 75232 242557 ~ 279418 (-)
LOC110517686 LOC106592870 coding upstream 93124 260449 ~ 297608 (-)
LOC110517689 LOC106598090 coding upstream 130950 298275 ~ 321254 (-)
LOC110527261 LOC106595203 coding upstream 159078 326403 ~ 332021 (-)
G566369 NA non-coding downstream 2098 147976 ~ 148691 (-)
G566317 NA non-coding downstream 4542 143874 ~ 146247 (-)
G566364 NA non-coding downstream 25221 124851 ~ 125568 (-)
G566326 NA non-coding downstream 50723 99444 ~ 100066 (-)
G566357 NA non-coding downstream 65866 82098 ~ 84923 (-)
G566385 NA non-coding upstream 34173 201498 ~ 202085 (-)
G566400 NA non-coding upstream 81512 248837 ~ 266014 (-)
G566403 NA non-coding upstream 94596 261921 ~ 262596 (-)
G566302 NA non-coding upstream 113540 280865 ~ 282107 (-)
LOC118965198 LOC106595074 other upstream 306559 473884 ~ 477537 (-)
LOC110519328 LOC106574843 other upstream 367694 527767 ~ 541749 (-)
LOC110487686 bora other upstream 533158 700093 ~ 708877 (-)
LOC110528715 LOC106594730 other upstream 664209 831066 ~ 842688 (-)

Expression


Co-expression Network