XLOC_024819


Basic Information

Item Value
gene id XLOC_024819
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 35002155 ~ 35042110 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049423
AGTTGGCTGTGTGCGCTGTTTTTACCTTGGACTGAAGAACTGTAACACCTCCTGACTGCCATTTTAAAGCAAGACCACAGACAAGTGTAAATAAAGCTCCGAATGTTTTCAACGCAAAGAAGAAAGCCATACACCTGGGATGCCTTAACGAAACTCCAGCGCCACCGACACGTTCTCCAGCTTCATCTGTCTGAAGTTTGGCCTGACGTGATGTTTTCTGTACATTTTCTTCTGACTGAGGACTTCCAAAAGCGAGATGAGTTTGAGGCCATCGCCCAGGTCTTTCTGCAGCCGTCCGATTTCAGCCCGTAAGCGGCACAGCTCCTCCTGCAGACTGGCGATATCGTTCTCCCTCTCAGCCGCAGCCTCCTCCGACGCCTGCTGCAGCACCAGCACCTCCTCCTGTGCCGCCCGCAGCTCCTCCTGCGCCTCCAGCAGCTCgctctccttctcctcctccagaCTGTCCATCTCCTCCTGGACTGAACGAAGCTGGGCTACAGGGTTGGAAAGATCAttggaaat

Function

GO:

id name namespace
GO:0006892 post-Golgi vesicle-mediated transport biological_process
GO:0035091 phosphatidylinositol binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049423 True 525 lncRNA 0.54 3 35002155 35042110

Neighbor

gene id symbol gene type direction distance location
XLOC_024818 NA coding downstream 22597 34975083 ~ 34979558 (-)
XLOC_024817 cdk10 coding downstream 28944 34956368 ~ 34973211 (-)
XLOC_024816 NA coding downstream 64024 34933831 ~ 34938131 (-)
XLOC_024815 gabarapl2 coding downstream 156853 34835553 ~ 34845302 (-)
XLOC_024814 frs2b coding downstream 261528 34727928 ~ 34740627 (-)
XLOC_024820 zgc:114046 coding upstream 2414 35044524 ~ 35045250 (-)
XLOC_024821 hist1h4l coding upstream 3693 35045803 ~ 35046114 (-)
XLOC_024822 si:dkey-108k21.19 coding upstream 5344 35047454 ~ 35047838 (-)
XLOC_024823 NA coding upstream 9946 35052056 ~ 35116923 (-)
XLOC_024824 kif15 coding upstream 26056 35068166 ~ 35095129 (-)
XLOC_024813 NA non-coding downstream 278179 34672068 ~ 34723976 (-)
XLOC_024811 NA non-coding downstream 358951 34641440 ~ 34643204 (-)
XLOC_024809 NA non-coding downstream 490053 34478097 ~ 34512102 (-)
XLOC_024826 NA non-coding upstream 60015 35102125 ~ 35139520 (-)
XLOC_024851 NA non-coding upstream 229168 35271278 ~ 35276350 (-)
XLOC_024853 NA non-coding upstream 270766 35312876 ~ 35313623 (-)
XLOC_024859 NA non-coding upstream 692941 35735051 ~ 35735523 (-)

Expression


Co-expression Network